Data from: Exome genotyping, linkage disequilibrium and population structure in loblolly pine (Pinus taeda L.)

Loblolly pine (Pinus taeda L.) is one of the most widely planted and commercially important forest tree species in the USA and worldwide, and is an object of intense genomic research. However, whole genome resequencing in loblolly pine is hampered by its large size and complexity and a lack of a good reference. As a valid and more feasible alternative, entire exome sequencing was hence employed to identify the gene-associated single nucleotide polymorphisms (SNPs) and to genotype the sampled trees.

Genomics and Genetics

Limnephilus lunatus genome annotations v0.5.3

This dataset presents the Limnephilus lunatus gene set BCM_v_0.5.3. RNA-Seq data was used with additional protein homology data for a MAKER automated annotation of the Limnephilus lunatus genome assembly 1.0. This dataset is free for all use.

insects 5000 program

Latrodectus hesperus genome annotations v0.5.3

This dataset presents the Latrodectus hesperus gene set BCM_v_0.5.3. RNA-Seq data was used with additional protein homology data for a MAKER automated annotation of the Latrodectus hesperus genome assembly 1.0. This dataset is free for all use.

insects 5000 program

Ladona fulva genome annotations v0.5.3

This dataset presents the Ladona fulva gene set BCM_v_0.5.3. RNA-Seq data was used with additional protein homology data for a MAKER automated annotation of the Ladona fulva genome assembly 1.0. This dataset is free for all use.

insects 5000 program

Halyomorpha halys genome assembly v1.0

The Baylor College of Medicine has sequenced and annotated the Halyomorpha halys genome as part of the i5k pilot project. This dataset presents the Halyomorpha halys genome v1.0. This assembly version is the pre-release version, prior to filtering and quality control by the National Center for Biotechnology Information's GenBank resource. If you wish to use this dataset, please follow the Baylor College of Medicine's conditions for data use: https://www.hgsc.bcm.edu/bcm-hgsc-conditions-use

insects 5000 program