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[Open Data]

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Annotated reference transcriptome for female Culicoides sonorensis biting midges

Unigene sequences were annotated by BlastX alignment to the non-redundant protein database (National Center for Biotechnology Information/GenBank) and the Aedes aegypti and Culex quinquefasciatus gene annotations (Vectorbase). This was done with a 1e-05 expectation value. Top hits are shown including accession numbers and description, if available. Unigene number and corresponding GenBank accession numbers are provided for all C. sonorensis genes. Both tables are modified from supplementary information tables at http://dx.doi.org/10.1371/journal.pone.0098123.s003 and numbered accordingly.

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FieldValue
Tags
biting midge
vector
de novo transcriptome
RNAseq
bluetongue
vitellogenesis
anautogeny
Culicoides sonorensis
hematophagy
insects
flies
Epizootic hemorrhagic disease virus
EHDV
NP104
Parent Record
Data from: The reference transcriptome of the adult female biting midge (Culicoides sonorensis) and differential gene expression profiling during teneral, blood, and sucrose feeding conditions
Modified
2019-08-05
Release Date
2015-06-02
Identifier
0e063bb5-f446-4809-89b3-e8747a97a61b
Spatial / Geographical Coverage Location
Manhattan, Kansas, USA
License
U.S. Public Domain
Data Dictionary

https://data.nal.usda.gov/dataset/annotated-reference-transcriptome-fema...
Contact Name
Saski, Christopher A.
Contact Email
saski@clemson.edu
Public Access Level
Public
Program Code
005:040 - Department of Agriculture - National Research
Bureau Code
005:18 - Agricultural Research Service
Extended Metadata: 
FieldValue
Authors
Nayduch, Dana (ORCID)
Saski, Christopher A. (ORCID)
Peer Reviewed
No
Funding Sources
Agricultural Research Service
Related Articles

Nayduch, D., Lee, M. B., & Saski, C. A. (2014). The Reference Transcriptome of the Adult Female Biting Midge (Culicoides sonorensis) and Differential Gene Expression Profiling during Teneral, Blood, and Sucrose Feeding Conditions. PLoS ONE, 9(5), e98123. https://doi.org/10.1371/journal.pone.0098123
Method Citation

Nayduch, D., Lee, M. B., & Saski, C. A. (2014). The Reference Transcriptome of the Adult Female Biting Midge (Culicoides sonorensis) and Differential Gene Expression Profiling during Teneral, Blood, and Sucrose Feeding Conditions. PLoS ONE, 9(5), e98123. https://doi.org/10.1371/journal.pone.0098123
Dataset DOI (digital object identifier)
10.15482/USDA.ADC/1193288
Related Content
Data from: The reference transcriptome of the adult female biting midge (Culicoides sonorensis)...
FieldValue
OSTI Identifier
ISO Topic(s)
biota
State or Territory
Kansas
Ag Data Commons Keywords
  • Agroecosystems & Environment
  • Agroecosystems & Environment
  • Parasites and Vectors
Program
Veterinary Pest Genomics Center

Suggested Citation:

(dataset) Nayduch, Dana; Saski, Christopher A. (2015). Annotated reference transcriptome for female Culicoides sonorensis biting midges. Ag Data Commons. https://doi.org/10.15482/USDA.ADC/1193288. Accessed 2023-12-04.