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anogla_BCM_version_0.5.3.tar_0.gz (232.45 MB)

Anoplophora glabripennis genome annotations v0.5.3

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posted on 2024-02-15, 17:24 authored by Duane MckennaDuane Mckenna, Daniel S.T. Hughes, Stephen Richards

This dataset presents the Anoplophora glabripennis gene set BCM_v_0.5.3. RNA-Seq data was used with additional protein homology data for a MAKER automated annotation of the Anoplophora glabripennis genome assembly 1.0.


Resources in this dataset:

  • Resource Title: Anoplophora glabripennis genome annotations v0.5.3.

    File Name: anogla_BCM_version_0.5.3.tar.gz

    Resource Description: The attached tar.gz archive (AGLA_BCM_version_0.5.3.tar.gz) contains the following files:

    AGLA.CDS.fna. CDS sequences of the genome annotations v0.5.3.

    AGLA.faa. Amino acid sequences of the genome annotations v0.5.3.

    AGLA.fna. cDNA sequences of the genome annotations v0.5.3.

    AGLA.Models.gff3. Gff3 of all gene predictions of the genome annotations v0.5.3.

    AGLA.Analysis.gff3 Gff3 of all evidence contributing to the genome annotations v0.5.3.

Funding

National Human Genome Research Institute: U54 HG003273

National Science Foundation: 1355169

History

Data contact name

McKenna, Duane D.

Data contact email

dmckenna@memphis.edu

Publisher

Ag Data Commons

Theme

  • Not specified

ISO Topic Category

  • biota

Ag Data Commons Group

  • Insects - i5K

National Agricultural Library Thesaurus terms

genomics; Anoplophora glabripennis; genes; genome assembly

Pending citation

  • No

Public Access Level

  • Public

Preferred dataset citation

McKenna, Duane D.; Hughes, Daniel S.T.; Richards, Stephen (2018). Anoplophora glabripennis genome annotations v0.5.3. Ag Data Commons. https://doi.org/10.15482/USDA.ADC/1439438

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    Categories

    Keywords

    genome annotationAnoplophora glabripennis

    Licence

    CC BY-SA 4.0

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