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Barley Genotyping SNPs Annotated using SNPMeta

genotype illustration

SNPs annotations were derived from publicly available DNA sequences in GenBank using BLAST. Gene name, functional impact, and other information are returned using the program SNPMeta available for download at https://github.com/MorrellLAB/SNPMeta.

These are SNPs on two Illumina GoldenGate genotyping arrays and one 9k iSelect genotyping array. The ascertainment scheme for the SNPs is available in Close, Timothy J., et al. "Development and implementation of high-throughput SNP genotyping in barley." BMC genomics 10.1 (2009): 1.

Sponsorship: US National Institute for Food and Agriculture (NIFA) (2011-68002-30029); USDA National Needs Fellowship (USDA NIFA 2011-38420-20068); USDA - Agricultural Research Service (Appropriation No. 5430-21000-006-00D); Kansas State University

FieldValue
Tags
Modified
2019-08-05
Release Date
2018-06-06
Identifier
e44c2335-5d80-41b5-a0c2-95cd5d42d828
Publisher
University of Minnesota
Temporal Coverage
January 1, 2013 to December 31, 2013
License
Data Dictionary
Contact Name
Kono, Thomas J.Y.
Contact Email
Public Access Level
Public