License

U.S. Public Domain
[Open Data]

Other Access

The information on this page (the dataset metadata) is also available in these formats:

JSON RDF

Social

Cimex Lectularius Genome Assembly 1.0

The Baylor College of Medicine recently sequenced and annotated the Cimex lectularius genome as part of the i5k pilot project. The C. lectularius research community has manually reviewed and curated the computational gene predictions and generated an official gene set, OGSv1.2.

The bed bug, Cimex lectularius, is a model organism for understanding dermonecrotic envenomation (sphingomylinase D). A key focus of research to understand neurotic fractions in venom. The bed bug also provides appropriate phylogenetic sampling across diversity of order Araneae.

This dataset presents the Cimex lectularius genome v1.0. This assembly version is the pre-release version, prior to filtering and quality control by the National Center for Biotechnology Information's GenBank resource: http://www.ncbi.nlm.nih.gov/assembly?LinkName=bioproject_assembly_all&fr.... Assembly method details will be available in a forthcoming publication.

If you wish to use this dataset, please follow the Baylor College of Medicine's conditions for data use: https://www.hgsc.bcm.edu/bcm-hgsc-conditions-use

Dataset Info

These fields are compatible with DCAT, an RDF vocabulary designed to facilitate interoperability between data catalogs published on the Web.
FieldValue
Authors
Benoit, Joshua B.
(ORCID)
Gibbs, Richard A.
(Scopus Author ID)
Worley, Kim C.
(ORCID)
Murali, Shwetha C.
(Scopus Author ID)
Vargo, Edward
(ORCID)
Lee, Sandra L.
(ORCID)
Muzny, Donna M.
(ORCID)
Palli, Subba R.
(ORCID)
Hughes, Daniel S.T.
(Scopus Author ID)
Schal, Coby
(ORCID)
Zhu, Fang
(Scopus Author ID)
Chao, Hsu
(Scopus Author ID)
Dinh, Huyen
(ORCID)
Doddapaneni, Harshavardhan
(ORCID)
Qu, Jiaxin
(ORCID)
Dugan-Perez, Shannon
(ORCID)
Blenau, Wolfgang
(ORCID)
Booth, Warren
(Scopus Author ID)
Han, Yi
(ORCID)
Richards, Stephen
(ORCID)
Product Type
Genome/Genetics Data
Contact Name
Benoit, Joshua B.
Contact Email
benoitja@UCMAIL.UC.EDU
Public Access Level
Public
Related Content
Cimex lectularius Genome Annotations v0.5.3
Cimex lectularius Official Gene Set v1.1
Cimex lectularius i5k Workspace@NAL
License
U.S. Public Domain
Funding Source(s)
Alfred P. Sloan Foundation
National Human Genome Research Institute
National Institutes of Health
National Science Foundation
U.S. Department of Housing and Urban Development
Dataset DOI (digital object identifier)
10.15482/USDA.ADC/1196730
Modified Date
2018-12-11
Release Date
2015-07-23
Ag Data Commons Keywords: 
  • Genomics & Genetics
  • Genomics & Genetics
  • Genome
  • Genomics & Genetics
  • Genome
  • Genome assembly
Program: 
National Agricultural Library Thesaurus Term: 
genome assembly
User-supplied Tags: 
Organism project
Cimex lectularius
i5k
insects
bed bug
ISO Topic(s): 
health

Suggested Citation:

(dataset) Benoit, Joshua B.; Gibbs, Richard A.; Worley, Kim C.; Murali, Shwetha C. ; Vargo, Edward; Lee, Sandra L.; Muzny, Donna M. ; Palli, Subba R. ; Hughes, Daniel S.T.; Schal, Coby; Zhu, Fang; Chao, Hsu ; Dinh, Huyen ; Doddapaneni, Harshavardhan ; Qu, Jiaxin; Dugan-Perez, Shannon; Blenau, Wolfgang; Booth, Warren; Han, Yi; Richards, Stephen (2015). Cimex Lectularius Genome Assembly 1.0. Ag Data Commons. http://dx.doi.org/10.15482/USDA.ADC/1196730