DNA sequences of each allele for 165 loci found in a population of 147 fully sequenced IncI2 plasmids with allelic identifiers.
Data is based on whole-genome sequences in the National Center for Biotechnology Information database as of July, 2017.
- IncI2 locus alleles databaseData
defining DNA sequences for locus alleles: loci with just one allele have...
Dataset InfoThese fields are compatible with DCAT, an RDF vocabulary designed to facilitate interoperability between data catalogs published on the Web.
|Equipment or Software Used|
Data sequences are for assigning allele identifiers for doing multi-locus sequence typing of IncI2 plasmids for population genetics studies. A plasmid sequence is mapped against the database to retrieve a list of alleles that are present.
Ag Data Commons
|Public Access Level|
Meinersmann, R.J. 2018. The Biology of IncI2 Plasmids Shown by Whole-Plasmid Multi-Locus Sequence Typing. (in review)
Agricultural Research Service
|Dataset DOI (digital object identifier)|
005:037 - Department of Agriculture - Research and Education
005:18 - Agricultural Research Service
- Genomics & Genetics