All data from the paper "Cultivar resistance to common scab disease of potato is dependent on the pathogen species." Three separate datasets are included:
A csv file with the disease severity of three common scab pathogens across 55 different potato cultivars in a greenhouse pot assay (Figures 2-5 in the associated paper). The included R script was used with this data to perform the ANOVA for the data from the greenhouse pot assay (Table 2 in the associated paper). This script can be used in R for any similar dataset to calculate the significance and percent of total variation for any number of user-defined fixed effects.
A zipped file with all of the qPCR data for the expression of the txtAB genes (Figure 6 in the associated paper).
An Excel file with the HPLC data for making the thaxtomin detection standard curve and quantifying the amount of thaxtomin in the test sample.
- Thaxtomin standard curve and quantification - All dataxlsx
Excel file with two sheets. The first sheet is all of the HPLC data used for...
- R script for estimating disease severitytxt
R script used in combination with the "18.4.2updatedfileAllDataPotAssay.csv...
- Combined qPCR data.zip
Zipped file that contains all qPCR data of txtAB gene expression in all...
- Streptomyces pot assay datacsv
Combined data from all Streptomyces - potato pot assays from the paper "...
Dataset InfoThese fields are compatible with DCAT, an RDF vocabulary designed to facilitate interoperability between data catalogs published on the Web.
Ag Data Commons
|Public Access Level|
Clarke, C.R., Kramer, C.G., Kotha, R.R., Wanner, L.A., Luthria, D.L., & Kramer, M. (expected 2019).
Agricultural Research Service
|Dataset DOI (digital object identifier)|
005:037 - Department of Agriculture - Research and Education
005:18 - Agricultural Research Service
- Plants & Crops
- Plant health
- Plants & Crops
- Genomics & Genetics