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Data from: Draft genome of the rice coral Montipora capitata obtained from linked-read sequencing

Gene models for protein-coding genes in the genome of the rice coral Montipora capitata, Hawaii Island. Annotation was performed with Augustus v3.3.1, using RNA-seq data as extrinsic evidence. Gene structures (.gff), coding sequences (_cds.fas), and amino acid sequences (_aa.fas) are provided.

Dataset Info

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FieldValue
Authors
Helmkampf, Martin
(ORCID)
Bellinger, M. Renee
(ORCID)
Geib, Scott M.
(ORCID)
Sim, Sheina B.
(ORCID)
Takabayashi, Misaki
(ORCID)
Product Type
Genome/Genetics Data
Spatial / Geographical Coverage Location
Waiopae, Hawaii Island
Equipment or Software Used
Publisher
Ag Data Commons
Contact Name
Helmkampf, Martin
Contact Email
Public Access Level
Public
Primary Article

Helmkampf, M., Bellinger R., Geib, S. M., Sim, S. B., Takabayashi, M. (2018). Draft genome of the rice coral Montipora capitata obtained from linked-read sequencing. Genome Biology and Evolution, in review (expected by December 2018)

License
Funding Source(s)
National Science Foundation
EPS-0903833
National Science Foundation
0833211
National Science Foundation
1345247
Agricultural Research Service
2040-22430-026-00-D
Dataset DOI (digital object identifier)
10.15482/USDA.ADC/1478412
Modified Date
2018-10-22
Release Date
2018-10-17
Ag Data Commons Keywords: 
  • Genomics & Genetics
  • Expression analysis
  • RNA Seq
  • Genomics & Genetics
  • Expression analysis
  • Genomics & Genetics
State or Territory: 
ISO Topic(s):