U.S. flag

An official website of the United States government

License

U.S. Public Domain
[Open Data]

Other Access

The information on this page (the dataset metadata) is also available in these formats:

JSON RDF

via the DKAN API

Data Extent

Social

Data from: Genomic regions associated with Mycoplasma ovipneumoniae presence in nasal secretions of domestic sheep

Genotypes of significant SNPs in all breed and individual breed analysis with detected Mycoplasma ovipneumoniae DNA copy number and log10 M. ovipneumoniae DNA copy number. SNP is denoted in the column headers with its rs number and the first 7 SNP are from the all breed analysis, the following 9 SNP from the Rambouillet analysis, the following 3 from the Polypay analysis, and the final 9 from the Suffolk analysis.

See all >>
FieldValue
Tags
Domestic sheep
Mycoplasma ovipneumoniae detection
GWAS
Modified
2022-12-30
Release Date
2021-03-05
Identifier
d20f97c0-5aa1-4762-9ed6-22388918a13e
Spatial / Geographical Coverage Area
POLYGON ((-121.640625 40.509344487962, -121.640625 48.512722992001, -110.56640625 48.512722992001, -110.56640625 40.509344487962))
Publisher
Ag Data Commons
Temporal Coverage
January 1, 2015 to December 31, 2018
License
U.S. Public Domain
Contact Name
Mousel, Michelle
Contact Email
michelle.mousel@usda.gov
Public Access Level
Public
Program Code
005:040 - Department of Agriculture - National Research
Bureau Code
005:18 - Agricultural Research Service
Extended Metadata: 
FieldValue
Authors
Mousel, Michelle R. (ORCID)
White, Stephen N. (ORCID)
Herndon, Maria K. (ORCID)
Herndon, David R. (Scopus Author ID)
Taylor, J. Bret (Scopus Author ID)
Becker, Gabrielle M.
Murdoch, Brenda M. (ORCID)
Peer Reviewed
No
Intended Use
This data set provides raw information from a genome wide association study which identified genomic associations with Mycoplasma ovipneumoniae detection in domestic sheep. This can be used to verify results of the manuscript submitted to a peer reviewed journal.
Use Limitations
There were a limited number of sheep and breeds in this study and the results may not be representative of all sheep.
Funding Sources
Agricultural Research Service
2090-32000-036-00D
Primary Article

null
Method Citation

null
Dataset DOI (digital object identifier)
10.15482/USDA.ADC/1520927
Product Type
Dataset
FieldValue
OSTI Identifier
ISO Topic(s)
farming
health
National Agricultural Library Thesaurus Term
genomics
Mycoplasma ovipneumoniae
nose
secretion
sheep
genotype
single nucleotide polymorphism
DNA
Rambouillet
Polypay
detection
Ag Data Commons Keywords
  • Genomics & Genetics
  • Animals & Livestock
  • Animal health
  • Animals & Livestock

Suggested Citations:

(original article) null

(dataset) Mousel, Michelle R.; White, Stephen N.; Herndon, Maria K.; Herndon, David R.; Taylor, J. Bret; Becker, Gabrielle M.; Murdoch, Brenda M. (2021). Data from: Genomic regions associated with Mycoplasma ovipneumoniae presence in nasal secretions of domestic sheep. Ag Data Commons. https://doi.org/10.15482/USDA.ADC/1520927. Accessed 2023-06-08.