Ag Data Commons
Browse
1/1
5 files

Data from: Response to selection for parasitism of a sub-optimal, low-preference host in an aphid parasitoid

dataset
posted on 2024-02-16, 18:19 authored by Keith HopperKeith Hopper, Kameron T. Wittmeyer, Kuhn L. Kristen, Kathryn Lanier

Risks of post-introduction evolution in insects introduced to control invasive pests have been discussed for some time, but little is known about responses to selection or genetic architectures of host adaptation and thus about the likelihood or rapidity of evolutionary shifts. We report here results on the response to selection and genetic architecture of parasitism of a sub-optimal, low-preference host species by an aphid parasitoid, Aphelinus rhamni, a candidate for introduction against the soybean aphid, Aphis glycines. The parasitoid was collected in Beijing, China, from the soybean aphid on a Rhamnus species. In the laboratory at the USDA-ARS, Newark, Delaware, we selected A. rhamni for increased parasitism of Rhopalsiphum padi by rearing the parasitoid on this aphid for three generations. We measured parasitism of R. padi at generations two and three, and at generation three, crossed and backcrossed parasitoids from the populations reared on R. padi with those from populations reared on Aphis glycines and compared parasitism of both R. padi and Aphis glycines among F1 and backcross females. Aphelinus rhamni responded rapidly to selection for parasitism of R. padi. Selection for R. padi parasitism reduced parasitism of Aphis glycines, the original host of A. rhamni. However, parasitism of R. padi did not increase from generation two to generation three of selection, suggesting reduced variance available for selection, which was indeed found. We tested the associations between 184 single nucleotide polymorphisms (SNP) and increased parasitism of R. padi and found 28 SNP loci, some of which were associated with increased and others with decreased parasitism of R. padi. We assembled and annotated the A. rhamni genome, mapped all SNP loci to contigs, and tested whether genes on contigs with SNP loci associated with parasitism were enriched for candidate genes or gene functions. We identified 80 genes on these contigs that mapped to 1.2 Mb of the 483 Mb genome of A. rhamni but found little enrichment of candidate genes or gene functions.


Resources in this dataset:

  • Resource Title: data_dictionary_selection_response_Aphelinus_rhamni.

    File Name: data_dictionary_selection_response_Aphelinus_rhamni.csv

    Resource Description: data dictionary for phenotype files


  • Resource Title: Selection_response_Aphelinus_rhamni_generation_2.

    File Name: Selection_response_Aphelinus_rhamni_generation_2_2011.csv

    Resource Description: Phenotypic data for parasitism of Rhopalosiphum padi by Aphelinus rhamni after two generations of selection on this aphid.


  • Resource Title: Selection_response_Aphelinus_rhamni_generation_3.

    File Name: Selection_response_Aphelinus_rhamni_generation_3_2011.csv

    Resource Description: Phenotypic data for parasitism of Rhopalosiphum padi by Aphelinus rhamni after three generations of selection on this aphid.


  • Resource Title: Selection_response_Aphelinus_rhamni_F1.

    File Name: Selection_response_Aphelinus_rhamni_F1_2011.csv

    Resource Description: Phenotypic data for parasitism of Rhopalosiphum padi by Aphelinus rhamni F1 females from cross between control females and females from three generations of selection on this aphid.


  • Resource Title: Selection_response_Aphelinus_rhamni_BC.

    File Name: Selection_response_Aphelinus_rhamni_BC_2011.csv

    Resource Description: Phenotypic data for parasitism of Rhopalosiphum padi by backcross females of Aphelinus rhamni from crosses between control males and F1 females that were hybrids of control females and males from populations that had been selected on this aphid for three generations.

Funding

USDA-ARS: 8010-22000-032-00D

USDA-NIFA: 2017-67013-26526

History

Data contact name

Hopper, Keith R.

Data contact email

Keith.Hopper@usda.gov

Publisher

Ag Data Commons

Intended use

These are phenotypic data on response to selection in a parasitoid for using a less preferred, suboptimal host. Information on genetic architecture is included in the associated paper and the genetic data are deposited the SRA database at NCBI. The results should interest those working on introductions for biological control of invasive pests.

Use limitations

The results are from laboratory experiments and may not apply to the field.

Temporal Extent Start Date

2005-09-10

Frequency

  • irregular

Theme

  • Not specified

Geographic Coverage

{"type":"FeatureCollection","features":[{"geometry":{"type":"Point","coordinates":[-243.69873046875,39.852302354196]},"type":"Feature","properties":{}}]}

Geographic location - description

Beijing, China

ISO Topic Category

  • biota
  • environment

National Agricultural Library Thesaurus terms

parasitism; parasitoids; risk; evolution; insects; hosts; Aphelinus; Aphis glycines; rearing; backcrossing; females; variance; single nucleotide polymorphism; loci; genes; insect pests; genome assembly; chromosome mapping; introduced species; evolutionary adaptation; biological control

OMB Bureau Code

  • 005:18 - Agricultural Research Service

OMB Program Code

  • 005:040 - National Research

ARS National Program Number

  • 304

Pending citation

  • No

Public Access Level

  • Public

Preferred dataset citation

Hopper, Keith R.; Wittmeyer, Kameron T.; Kristen, Kuhn L.; Lanier, Kathryn (2021). Data from: Response to selection for parasitism of a sub-optimal, low-preference host in an aphid parasitoid. Ag Data Commons. https://doi.org/10.15482/USDA.ADC/1522563