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Data from: Secretome data from Trichoderma reesei and Aspergillus niger cultivated in submerged and sequential fermentation methods

The cultivation procedure and the fungal strain applied for enzyme production may influence levels and profile of the proteins produced. The proteomic analysis data presented here provide critical information to compare proteins secreted by Trichoderma reesei and Aspergillus niger when cultivated through submerged and sequential fermentation processes, using steam-explosion sugarcane bagasse as inducer for enzyme production. The proteins were organized according to the families described in CAZy database as cellulases, hemicellulases, proteases/peptidases, cell-wall-protein, lipases, others (catalase, esterase, etc.), glycoside hydrolases families, predicted and hypothetical proteins. Further detailed analysis of this data is provided in "Secretome analysis of Trichoderma reesei and Aspergillus niger cultivated by submerged and sequential fermentation process: enzyme production for sugarcane bagasse hydrolysis" C. Florencio, F.M. Cunha, A.C Badino, C.S. Farinas, E. Ximenes, M.R. Ladisch (2016).

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FieldValue
Tags
secretome
cultivation procedure
Modified
2023-06-23
Release Date
2018-02-01
Identifier
47c20bfe-3da7-436a-b200-0684439eb8da
Publisher
Data in Brief
License
Creative Commons Attribution
Contact Name
Ladisch, Michael R.
Contact Email
ladisch@purdue.edu
Public Access Level
Public
Program Code
005:037 - Department of Agriculture - Research and Education
Bureau Code
005:00 - Department of Agriculture
Extended Metadata: 
FieldValue
Authors
Florencio, Camila (ORCID)
Cunha, Fernanda M. (Scopus Author ID)
Badino, Alberto C. (ORCID)
Farinas, Cristiane Sanchez (ORCID)
Ximenes, E.A. (ORCID)
Ladisch, Michael R. (ORCID)
Peer Reviewed
No
Intended Use
This data set supports the analysis of proteins secreted by T. reesei and A. niger under different cultivation methods. The data can be a useful tool to effectively select fungal strain and cultivation procedure for the production of proteins of interest. The data identify key enzymes from T. reesei and A. niger for combined use to effectively degrade lignocellulose substrates, and therefore provide an opportunity to help formulate enzyme cocktails according to characteristics of lignocellulose biomass and enzyme activities found in the secretome.
Equipment or Software Used
Mascot Daemon version 2.4.0 LC/MS
Funding Sources
U.S. Department of Agriculture
Hatch Project 10677
U.S. Department of Agriculture
Hatch Project 10646
Primary Article

Florencio, C., Cunha, F. M., Badino, A. C., Farinas, C. S., Ximenes, E., & Ladisch, M. R. (2016). Secretome data from Trichoderma reesei and Aspergillus niger cultivated in submerged and sequential fermentation methods. Data in Brief, 8, 588-598. https://doi.org/10.1016/j.dib.2016.05.080

AgID: 5247688
Related Articles

Florencio, C., Cunha, F. M., Badino, A. C., Farinas, C. S., Ximenes, E., & Ladisch, M. R. (2016). Secretome analysis of Trichoderma reesei and Aspergillus niger cultivated by submerged and sequential fermentation processes: Enzyme production for sugarcane bagasse hydrolysis. Enzyme and Microbial Technology, 90, 53-60. https://doi.org/10.1016/j.enzmictec.2016.04.011

AgID: 5293566
Method Citation

Florencio, C., Cunha, F. M., Badino, A. C., Farinas, C. S., Ximenes, E., & Ladisch, M. R. (2016). Secretome data from Trichoderma reesei and Aspergillus niger cultivated in submerged and sequential fermentation methods. Data in Brief, 8, 588-598. https://doi.org/10.1016/j.dib.2016.05.080

AgID: 5247688
Dataset DOI (digital object identifier)
10.1016/j.dib.2016.05.080
Product Type
Dataset
Preferred Dataset Citation
Florencio, C., Cunha, F. M., Badino, A. C., Farinas, C. S., Ximenes, E., & Ladisch, M. R. (2016). Secretome data from Trichoderma reesei and Aspergillus niger cultivated in submerged and sequential fermentation methods, <em>Data in Brief</em>, 8:588-598. https://doi.org/10.1016/j.dib.2016.05.080
FieldValue
ISO Topic(s)
biota
farming
National Agricultural Library Thesaurus Term
fungi
proteins
proteomics
sugarcane bagasse
databases
proteinases
carboxylic ester hydrolases
catalase
Trichoderma reesei
Aspergillus niger
hydrolysis
enzymes
biomass
sugars
production costs
steam
xylanases
beta-glucosidase
submerged fermentation
endo-1,4-beta-glucanase
cellulose
lignocellulose
enzymology
secretion
enzymatic hydrolysis
plant secretions and exudates
Ag Data Commons Keywords
  • Plants & Crops
  • Crop production
  • Plants & Crops
  • Agricultural Products
  • Plants
  • Genomics & Genetics
  • Proteomes
  • Agricultural Products
  • Genomics & Genetics

Suggested Citations:

(original article) Florencio, C., Cunha, F. M., Badino, A. C., Farinas, C. S., Ximenes, E., & Ladisch, M. R. (2016). Secretome data from Trichoderma reesei and Aspergillus niger cultivated in submerged and sequential fermentation methods. Data in Brief, 8, 588-598. https://doi.org/10.1016/j.dib.2016.05.080

(dataset) Florencio, C., Cunha, F. M., Badino, A. C., Farinas, C. S., Ximenes, E., & Ladisch, M. R (2016). Secretome data from Trichoderma reesei and Aspergillus niger cultivated in submerged and sequential fermentation methods, <em>Data in Brief</em>, 8:588-598. https://doi.org/10.1016/j.dib.2016.05.080