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Data from: Two new species of Plasmopara affecting wild grapes in the United States

Sequence alignments for cox2 and nc LSU rDNA datasets, as well as a reduced cox2 dataset used to determine the variable molecular characters that help to distinguish between the two new Plasmopara species described. The earliest specimen studied was collected in 1884, the most recent in 2021.

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FieldValue
Tags
downy mildew
Plasmopara
Vitaceae
Peronosporaceae
new species
NP303
Modified
2022-09-02
Release Date
2022-05-11
Identifier
4044c1b9-25e3-4fd6-b5d8-9808aeb47ecf
Spatial / Geographical Coverage Area
POINT (-76.930732727051 39.026824948261)
Publisher
Ag Data Commons
Temporal Coverage
January 1, 1884 to October 1, 2021
License
U.S. Public Domain
Contact Name
Salgado-Salazar, Catalina
Contact Email
catalina.salgado@usda.gov
Public Access Level
Public
Program Code
005:040 - Department of Agriculture - National Research
Bureau Code
005:18 - Agricultural Research Service
Extended Metadata: 
FieldValue
Authors
Salgado-Salazar, Catalina (ORCID)
Thines, Marco (ORCID)
Peer Reviewed
Yes
Intended Use
Sequence alignments for cox2 and nc LSU rDNA datasets, as well as a reduced cox2 dataset used to determine the variable molecular characters that help distinguishing between the two new species described.
Equipment or Software Used
MAFFT version 7 (Online server)
Funding Sources
Agricultural Research Service
8042-22000-298-00-D
Primary Article

Salgado-Salazar, C., & Thines, M. (2022). Two new species of Plasmopara affecting wild grapes in the USA. Mycological Progress, 21(7). https://doi.org/10.1007/s11557-022-01813-0

AgID: 7812938
Dataset DOI (digital object identifier)
10.15482/USDA.ADC/1526426
Product Type
Dataset
FieldValue
OSTI Identifier
ISO Topic(s)
biota
National Agricultural Library Thesaurus Term
new species
Plasmopara
grapes
United States
sequence alignment
ribosomal DNA
data collection
downy mildew
Vitaceae
fungal diseases of plants
taxonomy
Ag Data Commons Keywords
  • Genomics & Genetics
  • Genomics & Genetics
  • Sequence Assembly
  • Genomics & Genetics
  • Expression analysis
  • Genomics & Genetics
  • Expression analysis
  • RNA Seq
  • Agroecosystems & Environment
  • Agroecosystems & Environment
  • Agricultural pests
  • Plants & Crops
  • Plants & Crops
  • Plant health

Suggested Citations:

(original article) Salgado-Salazar, C., & Thines, M. (2022). Two new species of Plasmopara affecting wild grapes in the USA. Mycological Progress, 21(7). https://doi.org/10.1007/s11557-022-01813-0

(dataset) Salgado-Salazar, Catalina; Thines, Marco (2022). Data from: Two new species of Plasmopara affecting wild grapes in the United States. Ag Data Commons. https://doi.org/10.15482/USDA.ADC/1526426. Accessed 2023-05-30.