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U.S. Public Domain
[Open Data]

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Drosophila elegans genome annotations v0.5.3 for genome assembly Dele02082011

This research on Drosophila elegans genomics is part of the Drosophila modENCODE project.The Baylor College of Medicine is studying the comparative genomics of eight species of Drosophila, including biarmipes, bipectinata, elegans, eugracillis, ficusphila, kikkawai, rhopaloa, and takahashii. RNA-Seq data were used with additional protein homology data for a MAKER automated annotation of the Drosophila elegans genome assembly Dele02082011. This gene set is an unstable pre-release (v0.5.3), and is provided to facilitate manual curation and analyses. Gene identifiers from this gene set will not be maintained.

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FieldValue
Tags
i5k
Drosophila
Insects
Modified
2021-10-26
Release Date
2021-10-26
Identifier
d24afccb-d2e6-463d-9182-c4797425afc2
Spatial / Geographical Coverage Area
POINT (114.1694 22.3193)
Publisher
Ag Data Commons
Spatial / Geographical Coverage Location
Hong Kong, China
Temporal Coverage
August 30, 2011
License
U.S. Public Domain
Contact Name
Richards, Stephen
Contact Email
stephenr@BCM.EDU
Public Access Level
Public
Extended Metadata: 
FieldValue
Authors
Richards, Stephen (ORCID)
Hughes, Daniel S.T. (Scopus Author ID)
Peer Reviewed
No
Funding Sources
National Institutes of Health
DK015600-18
National Institutes of Health
1ROIGM082843
National Institutes of Health
U01HB004271
Method Citation

Chen, Z.-X., Sturgill, D., Qu, J., Jiang, H., Park, S., Boley, N., Suzuki, A. M., Fletcher, A. R., Plachetzki, D. C., FitzGerald, P. C., Artieri, C. G., Atallah, J., Barmina, O., Brown, J. B., Blankenburg, K. P., Clough, E., Dasgupta, A., Gubbala, S., Han, Y., … Richards, S. (2014). Comparative validation of the D. melanogaster modENCODE transcriptome annotation. Genome Research, 24(7), 1209-1223. https://doi.org/10.1101/gr.159384.113
Dataset DOI (digital object identifier)
10.15482/USDA.ADC/1523464
Product Type
Dataset
Related Content
Drosophila elegans genome assembly Dele02082011
FieldValue
OSTI Identifier
ISO Topic(s)
biota
National Agricultural Library Thesaurus Term
Drosophila
genomics
Biological Sciences
Insects and Entomology
Ag Data Commons Keywords
  • Genomics & Genetics
Program
Drosophila elegans
Organism project
Insects 5K – i5K

Suggested Citation:

(dataset) Richards, Stephen; Hughes, Daniel S.T. (2021). Drosophila elegans genome annotations v0.5.3 for genome assembly Dele02082011. Ag Data Commons. https://doi.org/10.15482/USDA.ADC/1523464. Accessed 2023-12-01.