U.S. flag

An official website of the United States government

License

U.S. Public Domain
[Open Data]

Other Access

The information on this page (the dataset metadata) is also available in these formats:

JSON RDF

via the DKAN API

Data Extent

Social

Drosophila ficusphila genome annotations v0.5.3 for genome assembly Dfic02082011

This research on Drosophila ficusphila genomics is part of the Drosophila modENCODE project.The Baylor College of Medicine is studying the comparative genomics of eight species of Drosophila, including biarmipes, bipectinata, elegans, eugracillis, ficusphila, kikkawai, rhopaloa, and takahashii. RNA-Seq data were used with additional protein homology data for a MAKER automated annotation of the Drosophila ficusphila genome assembly Dfic02082011. This gene set is an unstable pre-release (v0.5.3), and is provided to facilitate manual curation and analyses. Gene identifiers from this gene set will not be maintained.

See all >>
FieldValue
Tags
i5k
Drosophila
Insects
Modified
2021-10-26
Release Date
2021-10-26
Identifier
accfe869-6cb1-4061-859d-83d1dfd61c3c
Spatial / Geographical Coverage Area
POINT (121.21297836381 23.4495361144)
Publisher
Ag Data Commons
Spatial / Geographical Coverage Location
Taiwan
Temporal Coverage
August 31, 2011
License
U.S. Public Domain
Contact Name
Richards, Stephen
Contact Email
stephenr@BCM.EDU
Public Access Level
Public
Extended Metadata: 
FieldValue
Authors
Richards, Stephen (ORCID)
Hughes, Daniel S.T. (Scopus Author ID)
Peer Reviewed
No
Funding Sources
National Institutes of Health
DK015600-18
National Institutes of Health
1ROIGM082843
National Institutes of Health
U01HB004271
Method Citation

Chen, Z.-X., Sturgill, D., Qu, J., Jiang, H., Park, S., Boley, N., Suzuki, A. M., Fletcher, A. R., Plachetzki, D. C., FitzGerald, P. C., Artieri, C. G., Atallah, J., Barmina, O., Brown, J. B., Blankenburg, K. P., Clough, E., Dasgupta, A., Gubbala, S., Han, Y., … Richards, S. (2014). Comparative validation of the D. melanogaster modENCODE transcriptome annotation. Genome Research, 24(7), 1209-1223. https://doi.org/10.1101/gr.159384.113
Dataset DOI (digital object identifier)
10.15482/USDA.ADC/1523470
Product Type
Dataset
Related Content
Drosophila ficusphila genome assembly Dfic02082011
FieldValue
OSTI Identifier
ISO Topic(s)
biota
National Agricultural Library Thesaurus Term
Drosophila
genomics
Biological Sciences
Insects and Entomology
Ag Data Commons Keywords
  • Genomics & Genetics
Program
Drosophila ficusphila
Organism project
Insects 5K – i5K

Suggested Citation:

(dataset) Richards, Stephen; Hughes, Daniel S.T. (2021). Drosophila ficusphila genome annotations v0.5.3 for genome assembly Dfic02082011. Ag Data Commons. https://doi.org/10.15482/USDA.ADC/1523470. Accessed 2023-10-01.