Drosophila takahashii genome annotations v0.5.3 for genome assembly Dbip02082011

This research on Drosophila takahashii genomics is part of the Drosophila modENCODE project.The Baylor College of Medicine is studying the comparative genomics of eight species of Drosophila, including biarmipes, bipectinata, elegans, eugracillis, ficusphila, kikkawai, rhopaloa, and takahashii. RNA-Seq data were used with additional protein homology data for a MAKER automated annotation of the Drosophila takahashii genome assembly Dtak02082011. This gene set is an unstable pre-release (v0.5.3), and is provided to facilitate manual curation and analyses. Gene identifiers from this gene set will not be maintained.

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Drosophila takahashii genome annotations v0.5.3 for genome assembly Dtak02082011Data
The attached tar.gz archive (DTAK_BCM_version_0.5.3-Primary_Gene_Set.tar.gz...
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Field	Value
Tags	i5k Drosophila Insects
Modified	2021-10-26
Release Date	2021-10-26
Identifier	3401a2a0-4e48-4940-b66c-e6d79e8b3fc5
Spatial / Geographical Coverage Area	POINT (120.5258 23.3858)
Publisher	Ag Data Commons
Spatial / Geographical Coverage Location	Yun Shui, Taiwan
Temporal Coverage	September 1, 2011
License	U.S. Public Domain
Contact Name	Richards, Stephen
Contact Email	stephenr@BCM.EDU
Public Access Level	Public

Extended Metadata:

Field	Value
Authors	Richards, Stephen (ORCID) Hughes, Daniel S.T. (Scopus Author ID)
Peer Reviewed	No
Funding Sources	National Institutes of Health DK015600-18 National Institutes of Health 1ROIGM082843 National Institutes of Health U01HB004271
Method Citation	Chen, Z.-X., Sturgill, D., Qu, J., Jiang, H., Park, S., Boley, N., Suzuki, A. M., Fletcher, A. R., Plachetzki, D. C., FitzGerald, P. C., Artieri, C. G., Atallah, J., Barmina, O., Brown, J. B., Blankenburg, K. P., Clough, E., Dasgupta, A., Gubbala, S., Han, Y., … Richards, S. (2014). Comparative validation of the D. melanogaster modENCODE transcriptome annotation. Genome Research, 24(7), 1209-1223. https://doi.org/10.1101/gr.159384.113
Dataset DOI (digital object identifier)	10.15482/USDA.ADC/1523463
Product Type	Dataset
Related Content	Drosophila takahashii genome assembly Dtak02082011

Field	Value
OSTI Identifier
ISO Topic(s)	biota
National Agricultural Library Thesaurus Term	Drosophila genomics Biological Sciences Insects and Entomology
Ag Data Commons Keywords	Genomics & Genetics
Program	Drosophila takahashii Organism project Insects 5K – i5K

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