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Drosophila takahashii genome assembly Dtak02082011

This research on Drosophila takahashii genomics is part of the Drosophila modENCODE project.
The Baylor College of Medicine is studying the comparative genomics of eight species of Drosophila, including biarmipes, bipectinata, elegans, eugracillis, ficusphila, kikkawai, rhopaloa, and takahashii. The genome assembly presented here is the pre-submission version of Dtak_2.0, which is archived at the National Center for Biotechnology as GCA_000224235.2.

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FieldValue
Tags
i5k
Drosophila
Insects
Modified
2021-10-26
Release Date
2021-10-26
Identifier
45f5d25f-79bb-4c58-8633-45e0ed1ea88c
Spatial / Geographical Coverage Area
POINT (120.5258 23.3858)
Publisher
Ag Data Commons
Spatial / Geographical Coverage Location
Yun Shui, Taiwan
Temporal Coverage
September 1, 2011
License
U.S. Public Domain
Contact Name
Richards, Stephen
Contact Email
stephenr@BCM.EDU
Public Access Level
Public
Extended Metadata: 
FieldValue
Authors
Richards, Stephen (ORCID)
Qu, Jiaxin (ORCID)
Jiang, Huaiyang
Batterton, Matthew N. (Scopus Author ID)
Blankenburg, Kerstin P. (Scopus Author ID)
Gubbala, Sai (Scopus Author ID)
Han, Yi (ORCID)
Jayaseelan, Joy C. (ORCID)
Kalra, Divya (Scopus Author ID)
Kovar, Christie L. (Scopus Author ID)
Lee, Sandra L. (ORCID)
Li, Mingmei (Scopus Author ID)
Mathew, Tittu (Scopus Author ID)
Munidasa, Mala (Scopus Author ID)
Ongeri, Fiona (ORCID)
Perales, Lora (Scopus Author ID)
Pu, Ling-Ling (Scopus Author ID)
Saada, Nehad (Scopus Author ID)
Thornton, Rebecca L. (Scopus Author ID)
Warner, Crystal B. (Scopus Author ID)
Wu, Yuan-Qing (ResearcherID)
Zou, Xiaoyan (Scopus Author ID)
Scherer, Steven E. (Scopus Author ID)
Worley, Kim C. (ORCID)
Muzny, Donna M. (ORCID)
Gibbs, Richard A. (Scopus Author ID)
Peer Reviewed
No
Funding Sources
National Institutes of Health
DK015600-18
National Institutes of Health
1ROIGM082843
National Institutes of Health
U01HB004271
Method Citation

Chen, Z.-X., Sturgill, D., Qu, J., Jiang, H., Park, S., Boley, N., Suzuki, A. M., Fletcher, A. R., Plachetzki, D. C., FitzGerald, P. C., Artieri, C. G., Atallah, J., Barmina, O., Brown, J. B., Blankenburg, K. P., Clough, E., Dasgupta, A., Gubbala, S., Han, Y., … Richards, S. (2014). Comparative validation of the D. melanogaster modENCODE transcriptome annotation. Genome Research, 24(7), 1209-1223. https://doi.org/10.1101/gr.159384.113
Dataset DOI (digital object identifier)
10.15482/USDA.ADC/1523462
Product Type
Dataset
Related Content
Dtak_2.0
Drosophila takahashii genome annotations v0.5.3 for genome assembly Dbip02082011
FieldValue
OSTI Identifier
ISO Topic(s)
biota
National Agricultural Library Thesaurus Term
Drosophila
genomics
Biological Sciences
Insects and Entomology
genome assembly
Ag Data Commons Keywords
  • Genomics & Genetics
Program
Drosophila takahashii
Organism project
Insects 5K – i5K

Suggested Citation:

(dataset) Richards, Stephen; Qu, Jiaxin; Jiang, Huaiyang; Batterton, Matthew N.; Blankenburg, Kerstin P.; Gubbala, Sai; Han, Yi; Jayaseelan, Joy C.; Kalra, Divya; Kovar, Christie L.; Lee, Sandra L.; Li, Mingmei; Mathew, Tittu; Munidasa, Mala; Ongeri, Fiona; Perales, Lora; Pu, Ling-Ling; Saada, Nehad; Thornton, Rebecca L.; Warner, Crystal B.; Wu, Yuan-Qing; Zou, Xiaoyan; Scherer, Steven E.; Worley, Kim C.; Muzny, Donna M.; Gibbs, Richard A. (2021). Drosophila takahashii genome assembly Dtak02082011. Ag Data Commons. https://doi.org/10.15482/USDA.ADC/1523462. Accessed 2023-05-27.