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Frankliniella occidentalis genome annotations v0.5.3

This dataset presents the Frankliniella occidentalis gene set BCM_v_0.5.3. RNA-Seq data was used with additional protein homology data for a MAKER automated annotation of the Frankliniella occidentalis genome assembly 1.0. If you wish to use this dataset, please follow the Baylor College of Medicine's conditions for data use.

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FieldValue
Tags
i5k
Organism project
arthropods
Frankliniella occidentalis
Modified
2020-02-21
Release Date
2019-06-19
Identifier
911b281b-b055-4b03-ac8e-56a4eb0fe58e
Publisher
Ag Data Commons
License
Creative Commons Attribution Share-Alike
Contact Name
Rotenberg, Dorith
Contact Email
drotenb@ncsu.edu
Public Access Level
Public
Extended Metadata: 
FieldValue
Authors
Hughes, Daniel S.T. (Scopus Author ID)
Richards, Stephen (ORCID)
Rotenberg, Dorith (ORCID)
Peer Reviewed
No
Funding Sources
National Human Genome Research Institute
U54 HG003273
Related Articles

Rotenberg, D., Baumann, A. A., Ben-Mahmoud, S., Christiaens, O., Dermauw, W., Ioannidis, P., Jacobs, C. G., Vargas Jentzsch, I. M., Oliver, J. E., Poelchau, M. F., Rajarapu, S. P., Schneweis, D. J., Snoeck, S., Taning, C. N., Wei, D., Widana-Gamage, S. M. K., Hughes, D. S., Murali, S. C., Bailey, S., … Richards, S. (2020). Genome-enabled insights into the biology of thrips as crop pests. Cold Spring Harbor Laboratory. https://doi.org/10.1101/2020.02.12.941716
Dataset DOI (digital object identifier)
10.15482/USDA.ADC/1503959
Product Type
Dataset
Related Content
Frankliniella occidentalis genome assembly v1.0
Frankliniella occidentalis Official Gene Set OGSv1.0
FieldValue
OSTI Identifier
ISO Topic(s)
biota
National Agricultural Library Thesaurus Term
genome assembly
nucleotide sequences
sequence analysis
Frankliniella occidentalis
genes
Ag Data Commons Keywords
  • Genomics & Genetics
  • Genome
  • Genome annotation
  • Genomics & Genetics
  • Genomics & Genetics
  • Genome
Program
Organism project
Insects 5K – i5K
Frankliniella occidentalis

Suggested Citation:

(dataset) Hughes, Daniel S.T.; Richards, Stephen; Rotenberg, Dorith (2019). Frankliniella occidentalis genome annotations v0.5.3. Ag Data Commons. https://doi.org/10.15482/USDA.ADC/1503959. Accessed 2023-12-07.