GENOSIM

GENOSIM

The genosim package simulates genotypes, breeding values, and phenotypes; simulates DNA sequence read depth (numbers of A and B alleles); and resolves SNP conflicts between parent and offspring genotypes.

See all >>

GENOSIMhtml
download page

Explore Data

Field	Value
Modified	2022-02-08
Release Date	2019-05-02
Identifier	0c9fa00a-c039-477a-8272-361965b6223f
Publisher	United States Department of Agriculture
License	Creative Commons CCZero
Contact Name	Hubbard, Suzanne
Contact Email	suzanne.hubbard@usda.gov
Public Access Level	Public
Program Code	005:040 - Department of Agriculture - National Research
Bureau Code	005:18 - Agricultural Research Service

Extended Metadata:

Field	Value
Authors	VanRaden, Paul M. (ORCID)
Peer Reviewed	No
Funding Sources	Agricultural Research Service
Primary Article	VanRaden, P. (2008). Efficient Methods to Compute Genomic Predictions. Journal of Dairy Science, 91(11), 4414-4423. https://doi.org/10.3168/jds.2007-0980 AgID: 27183
Product Type	Model
Related Content	GENOSIM information and download page FINDMAP FINDHAP ConvertCufflinksToExcel MTDFREML: Multiple-trait derivative-free restricted maximum likelihood BESTPRED: Best Prediction Programs MTGSAM: Multiple-Trait Gibbs Sampler for Animal Models

Field	Value
ISO Topic(s)	biota
National Agricultural Library Thesaurus Term	computer software models single nucleotide polymorphism breeding value phenotype nucleotide sequences progeny
Ag Data Commons Keywords	Genomics & Genetics Genome Genomics & Genetics

Suggested Citations:

(original article) VanRaden, P. (2008). Efficient Methods to Compute Genomic Predictions. Journal of Dairy Science, 91(11), 4414-4423. https://doi.org/10.3168/jds.2007-0980

(dataset) VanRaden, Paul M. (2019). GENOSIM. United States Department of Agriculture. https://data.nal.usda.gov/dataset/genosim. Accessed 2023-06-01.

License

Other Access

Social

Suggested Citations: