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Gerris buenoi genome annotations v0.5.3

The Gerris buenoi genome was recently sequenced and annotated as part of the i5k pilot project by the Baylor College of Medicine. This dataset presents the Gerris buenoi gene set BCM_v_0.5.3, which was generated computationally. RNA-Seq data was used with additional protein homology data for a MAKER automated annotation of the Gerris buenoi genome assembly 1.0.

NOTE: This gene set is an unstable pre-release (v0.5.3), and was provided to facilitate manual curation and analyses before the official gene set is released. Gene identifiers from this gene set will likely not be maintained.

If you wish to use this dataset, please follow the Baylor College of Medicine's conditions for data use: https://www.hgsc.bcm.edu/bcm-hgsc-conditions-use

Dataset Info

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FieldValue
Authors
Armisén, David
(ORCID)
Rajakumar, Rajendhran
(ORCID)
Friedrich, Markus
(ORCID)
Benoit, Joshua B.
(ORCID)
Robertson, Hugh M.
(ORCID)
Panfilio, Kristen A.
(ORCID)
Ahn, Seung-Joon
(ORCID)
Poelchau, Monica
(ORCID)
Chao, Hsu
Dinh, Huyen
(ORCID)
Doddapaneni, HarshaVardhan
(ORCID)
Dugan-Perez, Shannon
(ORCID)
Gibbs, Richard A.
Hughes, Daniel S.T.
Han, Yi
(ORCID)
Lee, Sandra L.
(ORCID)
Murali, Shwetha C.
Muzny, Donna M.
(ORCID)
Qu, Jiaxin
(ORCID)
Worley, Kim C.
(ORCID)
Munoz-Torres, Monica
(ORCID)
Abouheif, Ehab
Bonneton, François
(ORCID)
Chen, Travis
(ORCID)
Chiang, Li-Mei
Childers, Christopher
(ORCID)
Cridge, Andrew
(ORCID)
Crumière, Antonin
(ORCID)
Decaras, Amélie
Didion, Elise
(ORCID)
Duncan, Elizabeth J.
(ORCID)
Elpidina, Elena
(ORCID)
Fave, Marie Julie
Finet, Cedric
Jacobs, Chris G.C.
(ORCID)
Jarvela, Alys
(ORCID)
Jennings, Emily C.
(ORCID)
Jones, Jeffery W.
Lesoway, Maryna
(ORCID)
Lovegrove, Mackenzie R.
Martynov, Alexander
(ORCID)
Oppert, Brenda
(ORCID)
Lilico-Ouachour, Angelica
Rajakumar, Arjuna
Refki, Peter N.
Rosendale, Andrew J.
(ORCID)
Santos, Maria Emilia
Toubiana, William
van der Zee, Maurijn
(ORCID)
Vargas Jentzsch, Iris M.
(ORCID)
Vargas Lowman, Aidamalia
Viala, Sèverine
(ORCID)
Richards, Stephen
(ORCID)
Khila, Abderrahman
(ORCID)
Product Type
Genome/Genetics Data
Contact Name
Armisén, David
Contact Email
Public Access Level
Public
Related Article

Armisen, D., Rajakumar, R., Friedrich, M., Benoit, J., Robertson, H., & Panfilio, K. et al. (2018). The genome of the water strider Gerris buenoi reveals expansions of gene repertoires associated with adaptations to life on the water. Biorxiv 242230.

Related Content
License
Funding Source(s)
European Research Council
616346
National Human Genome Research Institute
U54 HG003273
Deutsche Forschungsgemeinschaft
PA 2044/1-1
Deutsche Forschungsgemeinschaft
SFB 680
Dataset DOI (digital object identifier)
10.15482/USDA.ADC/1423875
Modified Date
2018-12-11
Release Date
2018-01-08
Ag Data Commons Keywords: 
  • Genomics & Genetics
  • Genomics & Genetics
  • Genome
  • Genomics & Genetics
  • Genome
  • Genome annotation
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