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Halyomorpha halys genome annotations v0.5.3

This dataset presents the Halyomorpha halys gene set BCM_v_0.5.3. RNA-Seq data was used with additional protein homology data for a MAKER automated annotation of the Halyomorpha halys genome assembly 1.0. If you wish to use this dataset, please follow the Baylor College of Medicine's conditions for data use: https://www.hgsc.bcm.edu/bcm-hgsc-conditions-use

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FieldValue
Tags
genome annotation
Halyomorpha halys
Modified
2020-03-23
Release Date
2019-05-07
Identifier
626bd926-127b-444d-8eec-3537fef5719d
Publisher
Ag Data Commons
License
Creative Commons Attribution Share-Alike
Contact Name
Sparks, Michael
Contact Email
Michael.Sparks@ARS.USDA.GOV
Public Access Level
Public
Extended Metadata: 
FieldValue
Authors
Gundersen-Rindal, Dawn E. (ORCID)
Hughes, Daniel S.T. (Scopus Author ID)
Richards, Stephen (ORCID)
Peer Reviewed
No
Funding Sources
National Human Genome Research Institute
U54 HG003273
Primary Article

Sparks, M. E., Bansal, R., Benoit, J. B., Blackburn, M. B., Chao, H., Chen, M., Cheng, S., Childers, C., Dinh, H., Doddapaneni, H. V., Dugan, S., Elpidina, E. N., Farrow, D. W., Friedrich, M., Gibbs, R. A., Hall, B., Han, Y., Hardy, R. W., Holmes, C. J., Hughes, D. S. T., Ioannidis, P., Cheatle Jarvela, A. M., Johnston, J. S., Jones, J. W., Kronmiller, B. A., Kung, F., Lee, S. L., Martynov, A. G., Masterson, P., Maumus, F., Munoz-Torres, M., Murali, S. C., Murphy, T. D., Muzny, D. M., Nelson, D. R., Oppert, B., Panfilio, K. A., Paula, D. P., Pick, L., Poelchau, M. F., Qu, J., Reding, K., Rhoades, J. H., Rhodes, A., Richards, S., Richter, R., Robertson, H. M., Rosendale, A. J., Tu, Z. J., Velamuri, A. S., Waterhouse, R. M., Weirauch, M. T., Wells, J. T., Werren, J. H., Worley, K. C., Zdobnov, E. M., & Gundersen-Rindal, D. E. (2020). Brown marmorated stink bug, Halyomorpha halys (Stål), genome: putative underpinnings of polyphagy, insecticide resistance potential and biology of a top worldwide pest. BMC Genomics, 21(1). https://doi.org/10.1186/s12864-020-6510-7
Method Citation

Sparks, M. E., Bansal, R., Benoit, J. B., Blackburn, M. B., Chao, H., Chen, M., Cheng, S., Childers, C., Dinh, H., Doddapaneni, H. V., Dugan, S., Elpidina, E. N., Farrow, D. W., Friedrich, M., Gibbs, R. A., Hall, B., Han, Y., Hardy, R. W., Holmes, C. J., Hughes, D. S. T., Ioannidis, P., Cheatle Jarvela, A. M., Johnston, J. S., Jones, J. W., Kronmiller, B. A., Kung, F., Lee, S. L., Martynov, A. G., Masterson, P., Maumus, F., Munoz-Torres, M., Murali, S. C., Murphy, T. D., Muzny, D. M., Nelson, D. R., Oppert, B., Panfilio, K. A., Paula, D. P., Pick, L., Poelchau, M. F., Qu, J., Reding, K., Rhoades, J. H., Rhodes, A., Richards, S., Richter, R., Robertson, H. M., Rosendale, A. J., Tu, Z. J., Velamuri, A. S., Waterhouse, R. M., Weirauch, M. T., Wells, J. T., Werren, J. H., Worley, K. C., Zdobnov, E. M., & Gundersen-Rindal, D. E. (2020). Brown marmorated stink bug, Halyomorpha halys (Stål), genome: putative underpinnings of polyphagy, insecticide resistance potential and biology of a top worldwide pest. BMC Genomics, 21(1). https://doi.org/10.1186/s12864-020-6510-7
Dataset DOI (digital object identifier)
10.15482/USDA.ADC/1503817
Product Type
Dataset
Related Content
Halyomorpha halys genome assembly v1.0
FieldValue
OSTI Identifier
ISO Topic(s)
biota
National Agricultural Library Thesaurus Term
genomics
Ag Data Commons Keywords
  • Genomics & Genetics
  • Genome
  • Genome annotation
  • Genomics & Genetics
  • Genome
  • Genomics & Genetics
Program
Halyomorpha halys
Organism project
Insects 5K – i5K

Suggested Citations:

(original article) Sparks, M. E., Bansal, R., Benoit, J. B., Blackburn, M. B., Chao, H., Chen, M., Cheng, S., Childers, C., Dinh, H., Doddapaneni, H. V., Dugan, S., Elpidina, E. N., Farrow, D. W., Friedrich, M., Gibbs, R. A., Hall, B., Han, Y., Hardy, R. W., Holmes, C. J., Hughes, D. S. T., Ioannidis, P., Cheatle Jarvela, A. M., Johnston, J. S., Jones, J. W., Kronmiller, B. A., Kung, F., Lee, S. L., Martynov, A. G., Masterson, P., Maumus, F., Munoz-Torres, M., Murali, S. C., Murphy, T. D., Muzny, D. M., Nelson, D. R., Oppert, B., Panfilio, K. A., Paula, D. P., Pick, L., Poelchau, M. F., Qu, J., Reding, K., Rhoades, J. H., Rhodes, A., Richards, S., Richter, R., Robertson, H. M., Rosendale, A. J., Tu, Z. J., Velamuri, A. S., Waterhouse, R. M., Weirauch, M. T., Wells, J. T., Werren, J. H., Worley, K. C., Zdobnov, E. M., & Gundersen-Rindal, D. E. (2020). Brown marmorated stink bug, Halyomorpha halys (Stål), genome: putative underpinnings of polyphagy, insecticide resistance potential and biology of a top worldwide pest. BMC Genomics, 21(1). https://doi.org/10.1186/s12864-020-6510-7

(dataset) Gundersen-Rindal, Dawn E.; Hughes, Daniel S.T.; Richards, Stephen (2019). Halyomorpha halys genome annotations v0.5.3. Ag Data Commons. https://doi.org/10.15482/USDA.ADC/1503817. Accessed 2023-03-31.