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Halyomorpha halys Official Gene Set v1.0

The Baylor College of Medicine sequenced and annotated the Halyomorpha halys genome as part of the i5k pilot project. The H. halys research community has manually reviewed and curated the computational gene predictions and generated an official gene set, OGSv1.0.

This dataset presents the Halyomorpha halys Official Gene Set (OGS) v1.0. The OGS is an integration of automatic gene predictions from NCBI's eukaryotic annotation pipeline, NCBI Halyomorpha halys Annotation Release 100 (https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Halyomorpha_halys/100/; ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/696/795/GCF_000696795.1_H...), with manual annotations by the research community (performed via the Apollo manual curation software, http://genomearchitect.org/).

Manual annotations performed by the community were downloaded from Apollo, QC'd, and merged with NCBI Halyomorpha halys Annotation Release 100 using the GFF3toolkit software (https://github.com/NAL-i5K/GFF3toolkit/releases/tag/v1.4.4). The resulting merged dataset was formatted for ingest into the i5k Workspace and GenBank databases, resulting in Halyomorpha halys Official Gene Set (OGS) v1.0.

FieldValue
Tags
Modified
2019-09-20
Release Date
2019-05-23
Identifier
5cd7cf46-52cc-47ba-a725-378f9b5f47d3
Publisher
Ag Data Commons
License
Contact Name
Sparks, Michael
Contact Email
Public Access Level
Public
Program Code
005:040 - Department of Agriculture - National Research
Bureau Code
005:18 - Agricultural Research Service