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Ag Data Commons migration begins October 18, 2023

The Ag Data Commons is migrating to a new platform – an institutional portal on Figshare. Starting October 18 the current system will be available for search and download only. Submissions will resume after the launch of our portal on Figshare in November. Stay tuned for details!

License

U.S. Public Domain
[Open Data]

Other Access

The information on this page (the dataset metadata) is also available in these formats:

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via the DKAN API

Social

i5K Workspace@NAL

The i5k Workspace @ NAL is a platform for communities around ‘orphaned’ arthropod genome projects to access, visualize, curate and disseminate their data. If you would like for us to host your genome project, please visit our Project and Data submission page, and then contact us to get started. You can also read our paper on the i5k Workspace, view our posters and talks, and find our software projects on github.

About the i5k initiative

The i5k initiative is a transformative project that aims to sequence and analyze the genomes of 5,000 arthropod species. The National Agricultural Library has partnered with the i5k initiative to create the i5k Workspace @ NAL, which serves any ‘orphaned’ arthropod genome project's hosting needs. For more information about the i5k initiative, read the paper and visit the website.

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FieldValue
Tags
NAL-KSD
Modified
2022-09-14
Release Date
2017-11-15
Identifier
009ca986-3a38-4a15-b96d-a7dacfc0fe4a
Publisher
USDA-ARS
License
U.S. Public Domain
Contact Name
Poelchau, Monica
Contact Email
monica.poelchau@ars.usda.gov
Public Access Level
Public
Extended Metadata: 
FieldValue
Authors
Poelchau, Monica (ORCID)
Childers, Christopher (ORCID)
Peer Reviewed
No
Funding Sources
Agricultural Research Service
Primary Article

Poelchau, M., Childers, C., Moore, G., Tsavatapalli, V., Evans, J., Lee, C.-Y., Lin, H., Lin, J.-W., & Hackett, K. (2014). The i5k Workspace@NAL—enabling genomic data access, visualization and curation of arthropod genomes. Nucleic Acids Research, 43(D1), D714-D719. https://doi.org/10.1093/nar/gku983

AgID: 60559
Product Type
Dataset
FieldValue
ISO Topic(s)
biota
National Agricultural Library Thesaurus Term
arthropods
genome
computer software
genomics
insects
mites
Araneae
Crustacea
marine ecosystems
humans
Animalia
evolution
disease vectors
sequence analysis
Ag Data Commons Keywords
  • Genomics & Genetics
  • Online database
Program
Insects 5K – i5K
AgBioData

Suggested Citations:

(original article) Poelchau, M., Childers, C., Moore, G., Tsavatapalli, V., Evans, J., Lee, C.-Y., Lin, H., Lin, J.-W., & Hackett, K. (2014). The i5k Workspace@NAL—enabling genomic data access, visualization and curation of arthropod genomes. Nucleic Acids Research, 43(D1), D714-D719. https://doi.org/10.1093/nar/gku983

(dataset) Poelchau, Monica; Childers, Christopher (2017). i5K Workspace@NAL. USDA-ARS. https://data.nal.usda.gov/dataset/i5k-workspacenal. Accessed 2023-12-03.