This data represents a small subset of the TERRA-REF release available on Dryad (LeBauer et al 2020, https://doi.org/10.5061/dryad.4b8gtht99). In addition to harvested biomass for each cultivar, it includes plot location, planting date, harvest date, fertilizer application, genotype / accession names and metadata, and additional agronomic management metadata for a population of Sorghum bicolor evaluated over two growing seasons. Please refer to the parent dataset for additional information on experimental details.
This dataset also contains an archive of software used to translate BrAPI formatted data into ARDN-compliant formats. The code and intermediate files used to demonstrate a run of the crop model DSSAT can be viewed on GitHub https://github.com/cct-datascience/ardn-terra-ref.
One way in which the data can be accessed is through a BrAPI-compliant endpoint at terraref.org/brapi. This dataset is a snapshot of the TERRA-REF BrAPI endpoint contents, representing the minimum data and metadata required to run a crop model. These BrAPI-compliant json files were downloaded from terraref.org/brapi. BrAPI is a data format widely used by plant breeders, and is described in Selby et al. 2019, https://doi.org/10.1093/bioinformatics/btz190
This a parent item for the following datasets:
- Season 4 and 6 List of Germplasmcsv
fields:
- germplasmDbId: unique identifier in terraref.org/bety...MD5:Explore Data23.15 KB - Season 4 and 6 Phenotypes in CSV formatcsv
Subset of information from the BrAPI Phenotypes file, converted to CSV...
MD5:Explore Data3.24 MB
Field | Value |
---|---|
Tags | |
Modified | 2023-09-28 |
Release Date | 2022-10-11 |
Frequency | Irregularly |
Identifier | 44aa549b-fdb1-447f-acc8-6e26a3c88ed4 |
Spatial / Geographical Coverage Area | POLYGON ((-111.9747967 33.0764953, -111.9747966 33.0745228, -111.9750963 33.074485715, -111.9750964 33.0764584, -111.9747967 33.0764953)) |
Publisher | Ag Data Commons |
Spatial / Geographical Coverage Location | Agricultural research field under the field scanner at the University of Arizona Maricopa Agricultural Center in Maricopa, Arizona |
Temporal Coverage | April 20, 2018 to August 2, 2018 |
License | |
Contact Name | LeBauer, David |
Contact Email | |
Public Access Level | Public |