Ag Data Commons | Providing Central Access to USDA’s Open Research Data

The Ag Data Commons is migrating

The Ag Data Commons is migrating to a new institutional portal on Figshare. The current system is available for search and download only. The new platform is open for submission with assistance from Ag Data Commons curators. Please contact NAL-ADC-Curator@usda.gov, if you need to publish or update your datasets.

USDA-FSIS: Isolated strains of Campylobacter spp. genome sequencing

National Center for Biotechnology Information

Whole genome sequencing of Campylobacter isolates

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VSNJV lineage 1.1 from US and Mexico 2012-2017

National Center for Biotechnology Information

Vesicular stomatitis New Jersey virus belonging to lineage 1.1, collected during outbreaks in the US and Mexico

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Differences between the global transcriptomes of Salmonella enterica serovars Dublin and Cerro during infection of bovine epithelial cells

National Center for Biotechnology Information

This study compares the global transcriptomes of highly pathogenic bovine-adapted S.

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Ascosphaera pollenicola strain:ATCC 62712 Genome sequencing and assembly

National Center for Biotechnology Information

Genome sequencing of a fungal bee symbiont as part of a comparative study of Ascosphaera fungi. This strain was isolated from Megachile rotundata pollen.

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Ascosphaera atra strain:ARSEF 5147 Genome sequencing and assembly

National Center for Biotechnology Information

Genome of the bee pathogen and ascomycete fungus Ascosphaera atra (ARSEF 5147). This is one of several part of comparative study of the Ascosphaera genus.

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Ascosphaera aggregata strain:USDA-ARS PIBMSR Wild2 Genome sequencing and assembly

National Center for Biotechnology Information

This strain of A aggregata came from a single spore isolate of Megachile rotundata by Agricultural Research Service Pollinating Insect Biology Management and Systematics Unit (USDA-ARS PIMBSR, Logan, Utah).

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Ascosphaera acerosa ATCC 201316 Genome sequencing and assembly

National Center for Biotechnology Information

Genome of the bee pathogen and ascomycete fungus Ascosphaera acerosa (ATCC 201316). This is one of several part of comparative study of the Ascosphaera genus.

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Puccinia striiformis f. sp. tritici PST-130 isolate:PST-130 alternate haplotype genome sequencing

National Center for Biotechnology Information

Puccinia striiformis f. sp. tritici alternate haplotype Genome sequencing and assembly

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Porcine Embryo Transcriptome During Stages of Elongation

National Center for Biotechnology Information

Comparison of transcriptomes of porcine embryos during three stages of elongation.

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Chromobacterium amazonense strain:BASUSDA_45 Genome sequencing and assembly

National Center for Biotechnology Information

This study was carried out to find pesticide degrading bacteria. The project is funded by BAS-USDA.

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