Data from: A High-Quality Genome Assembly from a Single, Field-collected Spotted Lanternfly (Lycorma delicatula) using the PacBio Sequel II System

A 2.3 Gb de novo genome assembly of a field-collected adult female Spotted Lanternfly (Lycorma delicatula) using a single PacBio SMRT Cell is provided. Supporting files for the manuscript "A High-Quality Genome Assembly from a Single, Field-collected Spotted Lanternfly (Lycorma delicatula) using the PacBio Sequel II System", include several intermediate versions of the assembly (raw output from Falcon, raw output from Falcon unzip, etc.) as well as the final assembly primary contigs and haplotigs (for the regions of the genome that were phased).

SLF-spotted lanternfly (Lycorma delicatula); adult winged. Photo: Stephen Ausmus, ARS Image Gallery

Divergence in host specificity and genetics among populations of Aphelinus certus

These are data on variation in host specificity and genetics among 16 populations of an aphid parasitoid, Aphelinus certus, 15 from Asia and one from North America. Host range was the same for all the parasitoid populations, but levels of parasitism varied among aphid species, suggesting adaptation to locally abundant aphids. Differences in host specificity did not correlate with geographical distances among parasitoid populations, suggesting that local adaption is mosaic rather than clinal, with a spatial scale of less than 50 kilometers. Analysis of reduced representation libraries for each population showed genetic differentiation among them. Differences in host specificity correlated with genetic distances among the parasitoid populations.

Genomics and Genetics

Raw Light-Level Geolocator Data from Golden-Winged Warblers Breeding at Three Sites in North America

21 raw light-level data files (.lig) from geolocators (Biotrak, Wareham, UK; model ML6240, 2-min light-sampling regime) deployed on 20 individual Golden-winged Warblers from three breeding locations in North America. These data were collected to provide information on the migration routes and timing, and nonbreeding locations of individuals from these populations to inform conservation and management strategies. These data are being released following the publication of these findings.

Golden-Winged Warbler

White-tailed deer density estimates across the eastern United States, 2008

The QDMA spatial map depicting deer density (deer per square mile) was digitized across the eastern United States. Estimates of deer density were: White = rare, absent, or urban area with unknown population, Green = less than 15 deer per square mile, Yellow = 15 to 30 deer per square mile, Orange = 30 to 40 deer per square mile, or Red = greater than 45 deer per square mile. These categories represent coarse deer density levels as identified in the QDMA report in 2009 and should not be used to represent current or future deer densities across the study region.

map of white-tailed deer estimates

NRCS Regional Conservation Partnership Program - Great Lakes Region

America’s Great Lakes — Superior, Michigan, Huron, Erie and Ontario — hold 21 percent of the world’s surface fresh water and host habitat for a variety of fish and wildlife species of concern. They provide drinking water for more than 40 million people and economic benefits from fishing and recreation. The Great Lakes Region is also a major agricultural area, with more than 55 million acres of land under production. This dataset includes a printer-friendly CCA map and shapefiles for GIS.

Maps and Multimedia

NRCS Regional Conservation Partnership Program - Chesapeake Bay Watershed

The largest estuary in North America, the Chesapeake Bay Watershed covers 64,000 square miles and includes more than 150 rivers and streams that drain into the Bay. More than 300 species of fish, shellfish and crab species and a wide array of other wildlife call the Bay home. With almost 30 percent of area in agricultural production, the region’s over 83,000 farms generate more than $10 billion annually. This dataset includes a printer-friendly CCA map and shapefiles for GIS.

Maps and Multimedia

Long-Term Agricultural Research (LTAR) network - Meteorological Collection

The LTAR network maintains stations for standard meteorological measurements including, generally, air temperature and humidity, shortwave (solar) irradiance, longwave (thermal) radiation, wind speed and direction, barometric pressure, and precipitation. Many sites also have extensive comparable legacy datasets. The LTAR scientific community decided that these needed…

Agroecosystems & Environment