The National Stream Internet project

National Stream Internet (NSI) project was developed as a means of providing a consistent, flexible analytical infrastructure that can be applied with many types of stream data anywhere in the country. A key part of that infrastructure is the NSI network, a digital GIS layer which has a specific topological structure that was designed to work effectively with SSNMs. The NSI network was derived from the National Hydrography Dataset Plus, Version 2 (NHDPlusV2) following technical procedures that ensure compatibility with SSNMs.

Agroecosystems & Environment

Geomorphic Road Analysis and Inventory Package (GRAIP)

Geomorphic Road Analysis and Inventory Package (GRAIP) is designed to help land managers learn about the impacts of road systems on erosion and sediment delivery to streams. GRAIP couples analytical tools with an inventory process to build an approach to roads analysis that can be locally calibrated in a repeatable fashion and with minimal effort. The full scope of GRAIP includes methods to inventory roads and analyze the inventory for surface erosion, gully risk, landslide risk and stream crossing failure risks. Methods to measure road surface erosion from sample sites are also included.

Agroecosystems & Environment

Water Quality Portal

The Water Quality Portal (WQP) is a cooperative service sponsored by the United States Geological Survey (USGS), the Environmental Protection Agency (EPA), and the National Water Quality Monitoring Council (NWQMC). It serves data collected by over 400 state, federal, tribal, and local agencies. Water quality…

Agroecosystems & Environment

ComBase: A Web Resource for Quantitative and Predictive Food Microbiology

ComBase includes a systematically formatted database of quantified microbial responses to the food environment with more than 60,000 records, and is used for:

  • Informing the design of food safety risk management plans
  • Producing Food Safety Plans and HACCP plans
  • Reducing food waste
  • Assessing microbiological risk in foods
Ag Data Commons

The Aquatic eDNAtlas Project: Lab Results Map - USFS RMRS

The eDNA samples in the eDNAtlas database describe species occurrence locations and were collected by the U.S. Forest Service and numerous agencies that have partnered with the National Genomics Center for Wildlife and Fish Conservation (NGC) throughout the United States. The eDNAtlas is accessed via an interactive ArcGIS Online (AGOL) map that allows users to view and download sample site information and lab results of species occurrence for the U.S. The results are primarily based on samples analyzed at the National Genomics Center for Wildlife and Fish Conservation (NGC) and associated with geospatial attributes created by the Boise Spatial Streams Group (BSSG).

Genomics and Genetics

The Triticeae Toolbox

The Triticeae Toolbox (T3) webportal hosts data generated by the Triticeae Coordinated Agricultural Project (CAP), funded by the National Institute for Food and Agriculture (NIFA) of the United States Department of Agriculture (USDA). T3 contains SNP, phenotypic, and pedigree data from wheat and barley germplasm in the Triticeae CAP integrating rapidly expanding DNA marker and sequence data with traditional phenotypic data.

Ag Data Commons

NAL Agricultural Thesaurus and Glossary

The NAL Agricultural Thesaurus (NALT) was first released by the National Agricultural Library in 2002, with in-depth coverage of agriculture, biology, and related disciplines. It contains over 135,000 terms, including 63,000 cross references, and is arranged into 17 subject categories which are used to…

Ag Data Commons

myPhyloDB

myPhyloDB is an open-source software package aimed at developing a user-friendly web-interface for accessing and analyzing all of your laboratory's microbial ecology data (currently supported project types: soil, air, water, microbial, and human-associated). The storage and handling capabilities of myPhyloDB archives users' raw sequencing files, and allows for easy selection of any combination of projects/samples from all of your projects using the built-in SQL database. The data processing capabilities of myPhyloDB are also flexible enough to allow the upload, storage, and analysis of pre-processed data or raw (454 or Illumina) data files using the built-in versions of Mothur and R.

Agroecosystems & Environment