Ag Data Commons migration begins October 18, 2023
The Ag Data Commons is migrating to a new platform – an institutional portal on Figshare. Starting October 18 the current system will be available for search and download only. Submissions will resume after the launch of our portal on Figshare in November. Stay tuned for details!
Data and code from: Use of automated capillary immunoassay for quantification of antibodies in chicken sera against recombinant Salmonella enterica serotype Heidelberg proteins
This entry contains all data and code required to reproduce the analysis of immune response data presented in the manuscript:
Yeh, H.-Y., J. G. Frye, C. R. Jackson, Q. D. Read, J. E. Line, and A. Hinton. 2023. Use of automated capillary immunoassay for quantification of antibodies in chicken sera against recombinant *Salmonella enterica* serotype Heidelberg proteins. *Journal of Microbiological Methods*.
Rmd notebook, HTML output of notebook, and xlsx data files are included.
Data from: Bivalent hemagglutinin and neuraminidase influenza replicon particle vaccines protect without causing vaccine associated enhanced respiratory disease in swine
Influenza A virus is a major respiratory pathogen in swine that leads to significant economic loss in the swine industry, and there is a critical need to improve on commercial vaccines. In this work we demonstrated RP HA and NA influenza vaccines stimulate immune responses, protect from disease, and avoid VAERD following infection with a distantly related virus. These data include individual pig responses used in statistical analyses and figures to support the conclusions of the paper.
Effect of Holstein genotype on immune response to an intramammary Escherichia coli challenge
The objective of this study was to determine the effects of Holstein genotype on innate immune response in an experimental intramammary Escherichia coli challenge model.
Data from: Dataset of bovine mammary gland dry secretion proteome from the end of lactation through day 21 of the dry period
This dataset is a label-free quantitation of proteins milk and dry secretions from the end of lactation through day 21 of the dry period using liquid chromatography with tandem mass spectrometry (LC-MS/MS).
Data from: Profile of the Spleen Transcriptome in Beef Steers with Variation in Gain and Feed Intake
This study examines the spleen in beef steers, a major lymphatic organ near the digestive tract, to determine whether it was also influencing individual feed efficiency status through immune responses. A total of 1216 genes were identified as differentially expressed. Data suggests the splenic contribution to some of the underlying variation among gain and intake may be a result of immune function and stress response. In addition, some of the differences in immune response functions may be related to gene copy number.
Data from: Identification and functional characterization of immunity-suppressing, candidate effector proteins in the parasitic weed Phelipanche aegyptiaca
All source data from the referenced paper (Figures 1b and Table 1). 22 Excel files of data from each experimental block of the reactive oxygen species assay, 1 Excel file of the combined data from the bacterial growth enhancement assay, 1 Excel file of the RT-qPCR data.
Data from: Dataset of proinflammatory cytokine and cytokine receptor gene expression in rainbow trout (Oncorhynchus mykiss) measured using a novel GeXP multiplex, RT-PCR assay
The dataset includes expression values of a suite of immune-relevant genes in rainbow trout (Oncorhynchus mykiss), concentrating on tumor necrosis factor and interleukin-1 ligand/receptor systems and acute phase response genes.
Data from: Transcriptomic and functional resources for the Small Hive Beetle Aethina tumida, a worldwide parasite of honey bees
Supplemental information from a project describing the transcriptome of a beetle parasite of honey bees
- 3x xlsx