Data from: Plasmopara echinaceae, a new species of downy mildew affecting cone flowers (Echinacea purpurea) in the United States
A new species of downy mildew (Oomycota, Peronosporales) is reported. This dataset contains alignments of DNA sequences (cox2 and LSU) markers, alignment of cox2 marker to be used in species identification and resulting phylogenetic trees.
- 3x fasta
Data from: Reverse-zoonoses of 2009 H1N1 pandemic influenza A viruses and evolution in United States swine results in viruses with zoonotic potential
Influenza A virus in swine hemagglutinin (HA) gene sequence data for 9 virus strains.
Annotation Data from: Genome Resources of Four Distinct Pathogenic Races Within Fusarium oxysporum f. sp. vasinfectum that Cause Vascular Wilt Disease of Cotton
Whole genome sequence (WGS) based identifications are being increasingly used by regulatory and public health agencies to facilitate the detection, investigation, and control of pathogens and pests. Fusarium oxysporum f. sp. vasinfectum is a significant vascular wilt pathogen of cultivated cotton and consists of several pathogenic races that are not each other’s closest phylogenetic relatives. We have developed WGS assemblies for isolates of F. oxysporum f. sp. vasinfectum race 1 (FOV1), race 4 (FOV4), race 5 (FOV5), and race 8 (FOV8) using a combination of Nanopore (MinION) and Illumina sequencing technology (Mi-Seq).
- 4x bin
Angus Sequence Dataset Collection
Whole genome sequence data for Bovidae Bos taurus - beef Angus, 30 animals in total. The data is in "fastq" format.
Effect of Holstein genotype on immune response to an intramammary Escherichia coli challenge
The objective of this study was to determine the effects of Holstein genotype on innate immune response in an experimental intramammary Escherichia coli challenge model.