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    Root Zone Water Quality Model 2 (RZWQM2) is a whole-system model for studying crop production and environmental quality under current and changing climate conditions. It emphasizes the effects of agricultural management practices on physical, chemical and biological processes. RZWQM2 is a one-dimensional model with a pseudo 2-dimensional drainage flow. Crop simulation options include the generic plant growth model, DSSAT-CSM 4.0 and HERMES SUCROS models. It also can simulate surface energy balance with components from the SHAW model and water erosion from the GLEAMS model. An automated parameter estimation algorithm (PEST) was added to RZWQM2 for objective model calibration and uncertainty analysis.

    ComBase: A Web Resource for Quantitative and Predictive Food Microbiology

      ComBase includes a systematically formatted database of quantified microbial responses to the food environment with more than 60,000 records, and is used for: * Informing the design of food safety risk management plans * Producing Food Safety Plans and HACCP plans * Reducing food waste * Assessing microbiological risk in foods

      Data from: Gas emissions from dairy barnyards

        To assess the magnitude of greenhouse gas (GHG) fluxes, nutrient runoff and leaching from dairy barnyards and to characterize factors controlling these fluxes, nine barnyards were built at the U.S. Dairy Forage Research Center Farm in Prairie du Sac, WI (latitude 43.33N, longitude 89.71W). The barnyards were designed to simulate outdoor cattle-holding areas on commercial dairy farms in Wisconsin. Each barnyard was approximately 7m x 7m; areas of barnyards 1-9 were 51.91, 47.29, 50.97, 46.32, 45.64, 46.30, 48.93, 48.78, 46.73 square meters, respectively. Factors investigated included three different surface materials (bark, sand, soil) and timing of cattle corralling. Each barnyard included a gravity drainage system that allowed leachate to be pumped out and analyzed. Each soil-covered barnyard also included a system to intercept runoff at the perimeter and drain to a pumping port, similar to the leachate systems.

        Low-Disturbance Manure Incorporation

          The LDMI experiment (Low-Disturbance Manure Incorporation) was designed to evaluate nutrient losses with conventional and improved liquid dairy manure management practices in a corn silage (*Zea mays*) / rye cover-crop (*Secale cereale*) system. The improved manure management treatments were designed to incorporate manure while maintaining crop residue for erosion control. Field observations included greenhouse gas (GHG) fluxes from soil, soil nutrient concentrations, crop growth and harvest biomass and nutrient content, as well as monitoring of soil physical and chemical properties. Observations from LDMI have been used for parameterization and validation of computer simulation models of GHG emissions from dairy farms (Gaillard et al., submitted). The LDMI experiment was performed as part of the Dairy CAP.

          Manure application methods for alfalfa-grass

            The MAMA experiment (Manure Application Methods for Alfalfa-Grass), from the USDA-ARS research station in Marshfield, WI was designed to evaluate nutrient and pathogen losses with conventional and improved liquid dairy manure management practices for alfalfa-grass production. Observations from MAMA have also been used for parameterization and validation of computer simulation models of greenhouse gas (GHG) emissions from dairy farms.