The Aquatic eDNAtlas Project: Lab Results Map - USFS RMRS

The eDNA samples in the eDNAtlas database describe species occurrence locations and were collected by the U.S. Forest Service and numerous agencies that have partnered with the National Genomics Center for Wildlife and Fish Conservation (NGC) throughout the United States. The eDNAtlas is accessed via an interactive ArcGIS Online (AGOL) map that allows users to view and download sample site information and lab results of species occurrence for the U.S. The results are primarily based on samples analyzed at the National Genomics Center for Wildlife and Fish Conservation (NGC) and associated with geospatial attributes created by the Boise Spatial Streams Group (BSSG).

Genomics and Genetics

The Range-Wide Bull Trout eDNA Project - USFS RMRS

The bull trout (Salvelinus confluentus) eDNA survey results Online Map allows users to view the survey results in an interactive map by coupling 1) predictions from the range-wide, spatially precise Climate Shield model on the location of natal habitats of bull trout with 2) a sampling template for every 8-digit hydrologic unit in the historical range of bull trout, based on the probability of detecting bull trout presence using environmental DNA (eDNA) sampling. The map provides the ability to zoom in and look at an area of interest, as well as to create queries or select an area to download points as a shapefile.

Genomics and Genetics

Compilation of climate data from heterogeneous networks across the Hawaiian Islands

This paper provides: (1) a summary of the available climate data in Hawai‘i including a detailed description of the various meteorological observation networks and data accessibility, and (2) a quality-controlled meteorological dataset across the Hawaiian Islands for the 25-year period 1990-2014. The dataset draws on observations from 471 climate stations and includes rainfall, maximum and minimum surface air temperature, relative humidity, wind speed, downward shortwave and longwave radiation data.

Agroecosystems & Environment

Effort Versus Reward: Preparing samples for fungal community characterization in high-throughput sequencing surveys of soils

This data set consists of four data files. The FASTA file, Representative OTU sequences.fa, contains representative sequences from the operational taxonomic units (OTUs) shown in the OTU table. FASTA files can be opened in simple text editors, and sequences can be aligned using the BLAST tool (http://blast.ncbi.nlm.nih.gov/Blast.cgi) or open source software, like AliView (http://www.ormbunkar.se/aliview/). There are two Excel data files: OTU table and heatmaps.xlsx and Diversity Indexes.xlsx. The former contains the raw abundance data for the observed OTUs from the different experimental sites. The latter is a breakdown of various diversity indices that are grouped based on experimental characteristics, such as extraction volume, extraction method, etc. Excel_Archive.zip is a compressed version of the two Excel data files that have been converted to more archival-friendly formats using Excel Archival Tool.

effort versus reward chart

National Land Cover Database 2011 (NLCD 2011)

National Land Cover Database 2011 (NLCD 2011) is the most recent national land cover product created by the Multi-Resolution Land Characteristics (MRLC) Consortium, providing the capability to assess national land cover changes and trends across the United States from 2001 to 2011 at a spatial resolution of 30 meters, based primarily on a decision-tree classification of circa 2011 Landsat satellite data.

Maps and Multimedia

NEWT: National Extension Web-mapping Tool

National Extension Web-mapping Tool (or NEWT), is the key in efforts to make spatial data available within the Cooperative Extension System. NEWT requires no GIS experience to use. NEWT provides access to relevant spatial data at a variety of scales (national, state, county) in useful formats (maps, tables, graphs),

Agricultural Products