Water Quality Portal

The Water Quality Portal (WQP) is a cooperative service sponsored by the United States Geological Survey (USGS), the Environmental Protection Agency (EPA), and the National Water Quality Monitoring Council (NWQMC). It serves data collected by over 400 state, federal, tribal, and local agencies. Water quality…

Agroecosystems & Environment

The Aquatic eDNAtlas Project: Lab Results Map - USFS RMRS

The eDNA samples in the eDNAtlas database describe species occurrence locations and were collected by the U.S. Forest Service and numerous agencies that have partnered with the National Genomics Center for Wildlife and Fish Conservation (NGC) throughout the United States. The eDNAtlas is accessed via an interactive ArcGIS Online (AGOL) map that allows users to view and download sample site information and lab results of species occurrence for the U.S. The results are primarily based on samples analyzed at the National Genomics Center for Wildlife and Fish Conservation (NGC) and associated with geospatial attributes created by the Boise Spatial Streams Group (BSSG).

Genomics and Genetics

The Range-Wide Bull Trout eDNA Project - USFS RMRS

The bull trout (Salvelinus confluentus) eDNA survey results Online Map allows users to view the survey results in an interactive map by coupling 1) predictions from the range-wide, spatially precise Climate Shield model on the location of natal habitats of bull trout with 2) a sampling template for every 8-digit hydrologic unit in the historical range of bull trout, based on the probability of detecting bull trout presence using environmental DNA (eDNA) sampling. The map provides the ability to zoom in and look at an area of interest, as well as to create queries or select an area to download points as a shapefile.

Genomics and Genetics

RF-CLASS: Remote-sensing-based Flood Crop Loss Assessment Service System

The Remote-sensing-based Flood Crop Loss Assessment Service System (RF-CLASS) is an Earth Observation (EO) based flood crop loss assessment cyber-service system operated by the Center for Spatial Information Science and Systems (CSISS), George Mason University. RF-CLASS supports flood-related crop statistics and insurance decision-making.

Maps and Multimedia

Arctic Peregrine Falcon Abundance on Cliffs Along the Colville River, Alaska, 1981-2002 and Covariate Input Files

This data set consists of fourteen data files. Rcode_arctic_peregrine_abundance.R contains R code that was used to analyze Arctic peregrine falcon data collected between 1981 and 2002. The code primarily uses the R package "UNMARKED" and is based on the Dail-Madsen model for estimating population abundance. To run this code in an R environment, download the file and open it in an R interpreter (such as RStudio). The remaining files are all covariate matrices that act as inputs to the R code.

Arctic Peregrine Falcon

Raw Light-Level Geolocator Data from Golden-Winged Warblers Breeding at Three Sites in North America

21 raw light-level data files (.lig) from geolocators (Biotrak, Wareham, UK; model ML6240, 2-min light-sampling regime) deployed on 20 individual Golden-winged Warblers from three breeding locations in North America. These data were collected to provide information on the migration routes and timing, and nonbreeding locations of individuals from these populations to inform conservation and management strategies. These data are being released following the publication of these findings.

Golden-Winged Warbler

Restoration of the 1936 Statewide Forest Survey of Minnesota

Over 300 stand and stock tables and summary of volume tables for Minnesota were restored from the first FIA Lake States forest survey conducted between 1930 and 1938. The level of detail of the data varied, but included area of forest cover types and stand size classes, and number of trees and volumes per acre by individual species. The data was presented in an Access database with a series of tables and queries. Definitions and further explanations about the restored historic data can be found in Staff Paper Series No. 241, Department of Forest Resources, University of Minnesota.

Minnesota forest restoration map

Risk prioritization of pork supply movements during an FMD outbreak in the US - Data and Materials

This study recruited experts from production, harvest, retail, and allied pork industries to assess 30 common pork supply movements for their industry criticality. Movements spanned five categories: equipment, live animal production, genetics, harvest, and people. Experts were recruited via email to the American Association of Swine Veterinarians (AASV) mailing list and their assessments were collected via an online survey. The Data.csv file contains the raw survey responses.

pig image

Effort Versus Reward: Preparing samples for fungal community characterization in high-throughput sequencing surveys of soils

This data set consists of four data files. The FASTA file, Representative OTU sequences.fa, contains representative sequences from the operational taxonomic units (OTUs) shown in the OTU table. FASTA files can be opened in simple text editors, and sequences can be aligned using the BLAST tool (http://blast.ncbi.nlm.nih.gov/Blast.cgi) or open source software, like AliView (http://www.ormbunkar.se/aliview/). There are two Excel data files: OTU table and heatmaps.xlsx and Diversity Indexes.xlsx. The former contains the raw abundance data for the observed OTUs from the different experimental sites. The latter is a breakdown of various diversity indices that are grouped based on experimental characteristics, such as extraction volume, extraction method, etc. Excel_Archive.zip is a compressed version of the two Excel data files that have been converted to more archival-friendly formats using Excel Archival Tool.

effort versus reward chart