Orussus abietinus mitochondrial genome assembly

The Baylor College of Medicine has sequenced and annotated the Orussus abietinus genome as part of the i5k pilot project. This dataset represents a targeted assembly and annotation of the mitochondrial genome.

insects 5000 program

Athalia rosae mitochondrial genome assembly

The Baylor College of Medicine has sequenced and annotated the Athalia rosae genome as part of the i5k pilot project. This dataset represents a separate targeted assembly of the mitochondrial genome.

insects 5000 program

Orussus abietinus Official Gene Set OGSv1.0

The Orussus abietinus genome was recently sequenced and annotated as part of the i5k pilot project by the Baylor College of Medicine. The Orussus abietinus research community has manually reviewed and curated the computational gene predictions and generated an official gene set, OGSv1.0. The general procedure for generating this OGS is outlined here: https://github.com/NAL-i5K/I5KNAL_OGS/wiki. OGSv1.0 was generated by merging gene set OABI-V0.5.3-Models generated by the Baylor College of Medicine, and community-curated models in the Apollo software, after QC of the Apollo output.

insects 5000 program

Athalia rosae Official Gene Set OGSv1.0

The Athalia rosae genome was recently sequenced and annotated as part of the i5k pilot project by the Baylor College of Medicine. The Athalia rosae research community has manually reviewed and curated the computational gene predictions and generated an official gene set, OGSv1.0. The general procedure for generating this OGS is outlined here: https://github.com/NAL-i5K/I5KNAL_OGS/wiki. OGSv1.0 was generated by merging gene set AROS-V0.5.3-Models generated by the Baylor College of Medicine, and community-curated models in the Apollo software, after QC of the Apollo output.

insects 5000 program

Leptinotarsa decemlineata Official Gene set v1.2

The Leptinotarsa decemlineata genome was recently sequenced and annotated as part of the i5k pilot project by the Baylor College of Medicine. The L. decemlineata research community has manually reviewed and curated the computational gene predictions and generated an official gene set, OGSv1.2. OGSv1.1 is an integration of automatic gene predictions from Maker (performed by Dan Hughes at Baylor College of Medicine) with manual annotations by the research community (done via the Apollo manual annotation software). The coordinates of OGSv1.1 were converted to the latest genome assembly, GCF_000500325.1, using coordinates_conversion and remap-gff3, to generate OGSv1.2.

insects 5000 program

Anoplophora glabripennis genome annotations v0.5.3

This dataset presents the Anoplophora glabripennis gene set BCM_v_0.5.3. RNA-Seq data was used with additional protein homology data for a MAKER automated annotation of the Anoplophora glabripennis genome assembly 1.0.

insects 5000 program

Trichogramma pretiosum genome assembly v1.0

The Baylor College of Medicine has sequenced and annotated the Trichogramma pretiosum genome as part of the i5k pilot project. This dataset presents the Trichogramma pretiosum genome v1.0. This assembly version is the pre-release version, prior to filtering and quality control by the National Center for Biotechnology Information's GenBank resource. Scaffold 109 was identified to be a complete Wolbachia genome, and was removed from the assembly on GenBank and relocated to a separate record (https://www.ncbi.nlm.nih.gov/nuccore/NZ_CM003641.1).

insects 5000 program

Trichogramma pretiosum genome annotations v0.5.3

This dataset presents the Trichogramma pretiosum gene set BCM_v_0.5.3. RNA-Seq data was used with additional protein homology data for a MAKER automated annotation of the Trichogramma pretiosum genome assembly 1.0.

insects 5000 program