This dataset presents the Leptinotarsa decemlineata gene set BCM_v_0.5.3, which was generated computationally. RNA-Seq data was used with additional protein homology data for a MAKER automated annotation of the Leptinotarsa decemlineata genome assembly 1.0.
This dataset presents the Leptinotarsa decemlineata genome v1.0. This assembly version is the pre-release version, prior to filtering and quality control by the National Center for Biotechnology Information's GenBank resource
The Legume Information System (legumeinfo.org) is the USDA-ARS genetics and genomics database for legume crops and relatives. Researchers can also submit their data directly. LIS houses data for more than a dozen species such as common bean and chickpea, peanut, and soybean, with genome sequences, genes and predicted functions, families of related genes, views of evolutionary relationships between genomic regions, genetic maps, markers, and links to germplasm resources.
Whole Genome Structural Analysis of Caribbean hair sheep reveals quantitative link to West African Ancestry
Illumina Ovine 50K data from West African, St Croix, and Bergamesca sheep used in conjunction with data from The International Sheep Genome Consortium to determine the ancestry/origin of Caribbean hair sheep.
This gene set (OGS v1.0) combines both automatically predicted and manually curated gene models. This community effort produced 530 manually curated gene models across developmental, physiological, RNAi regulatory, and immunity-related pathways. As previously shown in the pea aphid, RNAi machinery genes putatively involved in the microRNA pathway have been specifically duplicated. A comprehensive transcriptome enabled us to identify a number of gene families that are either missing or misassembled in the draft genome.
Diaci1.9 is interim version of the Diaphorina citri psyllid genome based on Pacbio long reads.
The Diaphorina citri MCOT v1.0 transcriptome is a genome independent transcriptome assembly that provides a comprehensive set of gene models and was performed with the MCOT pipeline where transcripts from Maker, Cufflinks, Trinity and Oases pipelines are combined.