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Maize Genetics Cooperation Stock Center Catalog of Stocks

    The Maize Genetics Cooperation Stock Center is operated by USDA/ARS, located at the University of Illinois, Urbana/Champaign, and integrated with the National Plant Germplasm System (NPGS). The center serves the maize research community by collecting, maintaining and distributing seeds of maize genetic stocks, and providing information about maize stocks and the mutations they carry through the Maize Genetics and Genomics Database (MaizeGDB).

    Data from: Secretome data from Trichoderma reesei and Aspergillus niger cultivated in submerged and sequential fermentation methods

      The cultivation procedure and the fungal strain applied for enzyme production may influence levels and profile of the proteins produced. The proteomic analysis data presented here provide critical information to compare proteins secreted by Trichoderma reesei and Aspergillus niger when cultivated through submerged and sequential fermentation processes, using steam-explosion sugarcane bagasse as inducer for enzyme production.

      BrAPI

        The Breeding API (BrAPI) Project is an effort to create a RESTful specification to enable interoperability among plant breeding databases. The Breeding API specifies a standard interface for plant phenotype/genotype databases to serve their data to crop breeding applications. It is a shared, open API, to be used by all data providers and data consumers who wish to participate.

        BAR- The Bio-Analytic Resource for Plant Biology

          BAR is a collection of web-based, user-friendly tools for exploring, visualizing, and analyzing large datasets from plants. Supported are expression data, Next-Gen sequence data, protein-protein interactions, polymorphisms / conservation, and protein 3-D structures.

          GenSAS v5.1: A Web-Based Platform for Structural and Functional Annotation and Curation of Genomes

            The Genome Sequence Annotation Server (GenSAS) is an online platform that provides a pipeline for whole genome structural and functional annotation. Users can upload genome sequences and select from a variety of tools for repeat masking, prediction of gene models and other structural features as well as functional annotation tools. GenSAS integrates with JBrowse and Apollo to provide visualization and editing.

            Genome Database for Vaccinium

              The Genome Database for Vaccinium (GDV) is a curated and integrated web-based relational database. The GDV is being developed to house and integrate genomic, genetic and breeding data for blueberry, cranberry and other Vaccinium species. The GDV will include the blueberry genome being sequenced by North Carolina State University, and annotated transcripts, traits, maps and markers being generated by Vaccinium researchers.

              Citrus Genome Database

                The Citrus Genome Database, known as CGD, is a USDA and NSF funded resource to enable basic, translational and applied research in citrus. It houses genomics, genetics and breeding data for citrus species and organisms associated with HLB. It is built by the Mainlab at Washingotn State University using the open-source, generic database platform Tripal.

                Insect Images: The Source for Entomology Photos

                  A joint project of The University of Georgia - Warnell School of Forestry and Natural Resources, College of Agricultural and Environmental Sciences - Department of Entomology, Center for Invasive Species and Ecosystem Health, Georgia Museum of Natural History, The Entomology Society of America and USDA Identification Technology Program, [Insect Images](https://www.insectimages.org/) image categories include: Insect Orders: Hymenoptera; Coleoptera; Hemiptera; Lepidoptera; Blattodea; Odonata; Dermaptera; Diptera; Orthoptera; Neuroptera; Phthiraptera; Mantodea; Thysanura; Isoptera; Thysanoptera; Phasmatoptera; and Related Organisms.

                  Weed Images: The Source for Images of Weeds and Weed Management in Agriculture

                    A joint project of The University of Georgia - Warnell School of Forestry and Natural Resources, College of Agricultural and Environmental Sciences - Department of Entomology, Center for Invasive Species and Ecosystem Health, Weed Science Society of America and the USDA/APHIS Identification Technology Program, [Weed Images](https://www.weedimages.org/) image categories include: Habit: Aquatics, Herbs/Forbs, Grasses, Shrubs, Trees, Vines; Herbicides: Mechanism of Action, HRAC or WSSA Group; Most Troublesome and Most Common Weed Lists.

                    Forestry Images: The Source for Forest Health and Silviculture Images

                      A joint project between University of Georgia - Bugwood Network and the U.S. Department of Agriculture, [Forestry Images](https://www.forestryimages.org/) image categories include: Forest Pests; Trees, Plants, and Stand Types; Silvicultural Practices; Urban Forestry; Wildlife; People, Places and Scenes.