Solanum lycopersicum Transcriptome or Gene expression
National Center for Biotechnology Information
Transcriptomics analysis on the regulation of tomato ripening by ethylene inhibitor methylcyclopropene (MCP)
Salmonella enterica Transcriptome or Gene expression
National Center for Biotechnology Information
Four strains of Salmonella enterica serovar Typhimurium were exposed to chlortetracycline or florfenicol for 30 min and then their mRNA was sequenced.
Gossypium hirsutum root tissue tillage trial
National Center for Biotechnology Information
RNA from Upland cotton (Gossypium hirsutum) root tissue under conventional disk or no tillage
Clastoptera arizonana Transcriptome or Gene expression
National Center for Biotechnology Information
Transcriptome data for the spittlebug, a potential vector for Pierce's disease in Arizona.
Homalodisca liturata Transcriptome or Gene expression
National Center for Biotechnology Information
Transcriptome data for the smoketree sharpshooter, a potential vector for Pierce's disease (Xylella fastidiosa), to determine which proteins the pest produces.
Cuerna arida Transcriptome or Gene expression
National Center for Biotechnology Information
Transcriptome of the desert leafhopper, a potential vector for Pierce's disease.
Transcriptome analysis of Williams 82 Glycine max (Soybean) 10 days after infection (dai) v.s. 0 dai (control)
National Center for Biotechnology Information
Primary leaves of three-weeks-old soybean plants cultivar Williams 82 were inoculated with a Mississippi isolate of Phakopsora pachyrhizi (MS06-1).
Regional epithelial cell diversity in the small intestine of pigs
Single cell suspensions enriched for epithelial cells were obtained from duodenum, jejunum, and ileum of a 7.5-week-old pig and subjected to single-cell RNA sequencing (scRNA-seq). scRNA-seq was performed to provide transcriptomic profiles of epithelial cells, with 695 cells annotated into 6 cell types. Deeper interrogation of data revealed previously undescribed cells in porcine intestine, and region-specific gene expression profiles within specific cell subsets. Data herein includes a .h5seurat files of the epithelial cell subsets analyzed.
Transcriptomic Analysis of Liver Indicates Novel Vaccine to Porcine Reproductive and Respiratory Virus Promotes Homeostasis in T-Cell and Inflammatory Immune Responses Compared to Commercial Vaccine in Pigs
National Center for Biotechnology Information
One of the largest impediments for commercial swine production is the presence of Porcine Reproductive and Respiratory Syndrome virus (PRRSV), a devastating RNA viral infection that is responsible for over $1 billion in loss in the U.S. annually.
Zygosaccharomyces rouxii NRRL Y-64007 Transcriptome
National Center for Biotechnology Information
Transcriptome sequencing of oleaginous Lipomyces yeast strain; Cells grown in YPD liquid medium at 25 C