Animal Germplasm Resources Information Network (A-GRIN)

Animal genetic resources underpin the livestock sector's production and profitability. As a result livestock industries contribute billions of dollars to national economies. The Animal Germplasm Resources Information Network (A-GRIN) mission is to acquire, evaluate and preserve these strategic resources so that industry and the research community can have access to a broad array of genetic variability for: national security, introduction of genetic variation, corrective breeding, and various research initiatives.

Ag Data Commons

MaizeGDB

MaizeGDB is a community-oriented, long-term, federally funded informatics service to researchers focused on the crop plant and model organism Zea mays. Genomic, genetic, sequence, germplasm, gene product, metabolic pathways, functional characterization, literature reference, diversity, and expression are among the datatypes stored at MaizeGDB. At the project's website are custom interfaces enabling researchers to browse data and to seek out specific information matching explicit search criteria. First released in 1991 with the name MaizeDB, the Maize Genetics and Genomics Database, now MaizeGDB (since 2003), is funded, developed, and hosted by the USDA-ARS located at Ames, Iowa.

Ag Data Commons

Data from: Color Analysis of Storage Roots from the USDA, ARS Sweetpotato Germplasm Collection

The periderm (skin) and stele (flesh) of sweet potato storage roots were measured using a Konica Minolta Chroma Meter, and data were recorded using the CIE 1976 L*a*b* and CIE L*C*h* color spaces. Data parameters presented are lightness (L*), red-green coordinate (a*), yellow-blue coordinate (b*), color intensity or chroma (C*), and hue angle (H*). Also included in this data set are percentage dry matter and root densities as these data are correlated to color values.

Plants and Crops

PeanutBase

PeanutBase (peanutbase.org) is the primary genetics and genomics database for cultivated peanut and its wild relatives. It houses information about genome sequences, genes and predicted functions, genetic maps, markers, links to germplasm resources, and maps of peanut germplasm origins.

Ag Data Commons

Legume Information System

The Legume Information System (legumeinfo.org) is the USDA-ARS genetics and genomics database for legume crops and relatives. Researchers can also submit their data directly. LIS houses data for more than a dozen species such as common bean and chickpea, peanut, and soybean, with genome sequences, genes and predicted functions, families of related genes, views of evolutionary relationships between genomic regions, genetic maps, markers, and links to germplasm resources.

Ag Data Commons

SoyBase and the Soybean Breeder's Toolbox

SoyBase is a repository for genetics, genomics and related data resources for soybean. It contains current genetic, physical and genomic sequence maps integrated with qualitative and quantitative traits.

Ag Data Commons

Germplasm Resources Information Network (GRIN)

The Germplasm Resources Information Network (GRIN) web server provides germplasm information about plants, animals, microbes and invertebrates important for food and agricultural production. These include lists of currently registered cultivars, historical seed and varietal catalogs, and related resources. There are more than 500,000 accessions (distinct varieties of plants) in the GRIN database. These accessions represent more than 10,000 species of plants. See the Helps and Hints page if you are having trouble getting your results.

Ag Data Commons