Sol Genomics Network (SGN)

The Sol Genomics Network (SGN) is a clade-oriented database dedicated to the biology of the Solanaceae family which includes a large number of closely related and many agronomically important species such as tomato, potato, tobacco, eggplant, pepper, and the ornamental Petunia hybrida. SGN is part…

Genomics and Genetics

Data from: Genetic Diversity and Population Structure of the USDA Sweetpotato (Ipomoea batatas) Germplasm Collections Using GBSpoly

Population structure and genetic diversity of 417 USDA sweetpotato (Ipomoea batatas) accessions originating from 8 broad geographical regions (Africa, Australia, Caribbean, Central America, Far East, North America, Pacific Islands, and South America) were determined using single nucleotide polymorphisms (SNPs) identified with a genotyping-by-sequencing (GBS) protocol, GBSpoly, optimized for highly heterozygous and polyploid species.

Plants and Crops

BAR- The Bio-Analytic Resource for Plant Biology

BAR is a collection of web-based, user-friendly tools for exploring, visualizing, and analyzing large datasets from plants. Supported are expression data, Next-Gen sequence data, protein-protein interactions, polymorphisms / conservation, and protein 3-D structures.

Genomics and Genetics

Plant Variety Protection Office - Scanned Certificates

This dataset provides the scans of issued certificates for a variety of plants. If you know the certificate number or applicant name simply enter the information in the search box. For certificates issued between 1970 and 1999, add two zeroes in front of the 7-digit number. Alternatively, you can search by selecting a crop from the list.

Plants and Crops

Data from: Genomic analyses of dominant US clonal lineages of Phytophthora infestans reveals a shared ancestry for US11 and US18 and a lack of recently shared ancestry for all other US lineages

The populations of the potato and tomato late blight pathogen, Phytophthora infestans, in the US are well known for emerging repeatedly as novel clonal lineages. These successions of dominant clones have historically been named US1 through US24, in order of appearance, since their first characterization using molecular markers. Hypothetically, these lineages can emerge by descent from prior lineages or as novel, independent lineages.

Agroecosystems & Environment

Eastern Potato Variety Development Database, (NE1231)

This is an interactive potato variety database that allows researchers and end-users to access and obtain potato variety trial results in one centralized site. It was developed primarily for scientists interested in potato variety development, growers, and allied industry members. The database is populated with the results of potato variety trials conducted in eight states (Florida, Maine, New Jersey, New York, North Carolina, Ohio, Pennsylvania, and Virginia) and two Canadian provinces (Prince Edward Island and Quebec).

Plants and Crops